Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2819260 114 1e-20 seq2990797 100 2e-16 seq2886078 100 2e-16 seq2549946 91.5 1e-13 seq1935421 91.5 1e-13 seq2991431 87.8 1e-12 seq2390000 87.8 1e-12 seq2212270 87.8 1e-12 seq2546035 84.2 2e-11 seq2282228 84.2 2e-11 seq2052140 82.4 6e-11 >seq2819260 Length=3103 Score = 114 bits (126), Expect = 1e-20 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 107539 TTTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCG 107598 ||||| | || || || ||||| || ||||| ||||| | || ||||| || || || Sbjct 2833 TTTATTAAAGCTTCAAGATGCAGATCTTTGTTAAAACCCTCACTGGCAAGACAATCACTC 2892 Query 107599 TCGAAACGGAG-GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAA 107657 ||||| ||| ||| || || ||| | | || || |||||| ||||| ||| Sbjct 2893 TCGAAGTCGAGAGCTCT-GACACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAA 2951 Query 107658 GGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAA 107717 || | ||| || |||||||| ||||| | ||| ||||| ||||| ||||| | | | Sbjct 2952 GGGATTCCCCCAGACCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGA 3011 Query 107718 ACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || |||||||||||||||| |||||||| ||||| | ||| |||| Sbjct 3012 ACCCTGGCGGACTACAACATCCAAAAGGAATCTACCCTCCACCTGGT 3058 >seq2990797 Length=389299 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| || || |||||||| || || | ||| ||| ||| Sbjct 336582 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTC- 336640 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||||| | | | |||||| |||||| || || ||||| | || ||||| Sbjct 336641 CGATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCA 336700 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| ||||| ||||||||||| | ||| | || || ||||| Sbjct 336701 GCAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAA 336760 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 || || ||||||||||| | ||| | || ||| | |||| || ||| Sbjct 336761 TATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 336809 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||| ||||| ||||| | || ||||| |||||||| ||||| ||| ||| Sbjct 336353 AATGCAAATCTTTGTGAAAACCCTGACCGGCAAGACCATTACGCTCGAAGTTGAGAGCTC 336412 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 |||||| | | | || || ||||||| || || || || | || ||||| Sbjct 336413 T-GATACTATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGGATTCCTCCGGATC 336471 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| | || | ||| || || || || || || | | || |||||||||| | Sbjct 336472 AGCAGAGGTTGATCTTTGCAGGAAAGCAACTTGAAGATGGGAGGACTCTGGCGGACTATA 336531 Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758 ||||||| ||||||||||| |||| Sbjct 336532 ACATTCAGAAGGAGTCTACCCTGCA 336556 >seq2886078 Length=74263 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| || || |||||||| || || | ||| ||| ||| Sbjct 36856 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTC- 36914 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||||| | | | |||||| |||||| || || ||||| | || ||||| Sbjct 36915 CGATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCA 36974 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| ||||| ||||||||||| | ||| | || || ||||| Sbjct 36975 GCAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAA 37034 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 || || ||||||||||| | ||| | || ||| | |||| || ||| Sbjct 37035 TATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 37083 >seq2549946 Length=35353 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| |||||| | || ||||| ||||| || ||||| || | Sbjct 27807 ATGCAAATCTTTGTGAAAACTCTGACTGGCAAGACCATCACGCTCGAAGTTGAAAACTCC 27748 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || || |||||| ||||| || || | || ||||||| Sbjct 27747 GATACTATTGATAATGTGAAGGCGAAGATTCAGGATAAGGAGGGGATTCCTCCGGATCAG 27688 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | || | ||| || || || || || || | | || |||||||||| ||| Sbjct 27687 CAGAGATTAATCTTTGCAGGGAAGCAACTTGAAGATGGGAGGACTTTGGCGGACTATAAC 27628 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||| ||||||||||| |||| Sbjct 27627 ATTCAGAAGGAGTCTACCCTGCA 27605 >seq1935421 Length=88102 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| |||||| | || ||||| ||||| || ||||| || | Sbjct 3104 ATGCAAATCTTTGTGAAAACTCTGACTGGCAAGACCATCACGCTCGAAGTTGAAAACTCC 3045 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || || |||||| ||||| || || | || ||||||| Sbjct 3044 GATACTATTGATAATGTGAAGGCGAAGATTCAGGATAAGGAGGGGATTCCTCCGGATCAG 2985 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | || | ||| || || || || || || | | || |||||||||| ||| Sbjct 2984 CAGAGATTAATCTTTGCAGGGAAGCAACTTGAAGATGGGAGGACTTTGGCGGACTATAAC 2925 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||| ||||||||||| |||| Sbjct 2924 ATTCAGAAGGAGTCTACCCTGCA 2902 >seq2991431 Length=29435 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| |||| || || |||||||| | ||| ||| ||| | Sbjct 24363 ATGCAGATCTTTGTTAAAACACTAACTGGAAAGACCATTACATTGGAAGTTGAGAGCTCG 24304 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || || ||||| || || ||||| | ||| || || Sbjct 24303 -GACACCATTGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGACCA 24245 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||| | || ||||| ||||||||||| | || || |||| |||||||| Sbjct 24244 GCAGAGGCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCAGGACCTTGGCTGACTACAA 24185 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||| || || |||| |||| Sbjct 24184 TATTCAGAAGGAATCGACCCTGCATCTGGT 24155 >seq2390000 Length=59661 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| |||| || || |||||||| | ||| ||| ||| | Sbjct 51475 ATGCAGATCTTTGTTAAAACACTAACTGGAAAGACCATTACATTGGAAGTTGAGAGCTCG 51534 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || || ||||| || || ||||| | ||| || || Sbjct 51535 -GACACCATTGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGACCA 51593 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||| | || ||||| ||||||||||| | || || |||| |||||||| Sbjct 51594 GCAGAGGCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCAGGACCTTGGCTGACTACAA 51653 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||| || || |||| |||| Sbjct 51654 TATTCAGAAGGAATCGACCCTGCATCTGGT 51683 >seq2212270 Length=153909 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||| ||||| ||||| | || ||||| ||||| || ||||| ||| ||| Sbjct 143499 AATGCAAATCTTTGTGAAAACCCTGACCGGCAAGACCATCACGCTCGAAGTTGAGAGCTC 143558 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 |||||| | | | || || |||||| || || || || | || ||||| Sbjct 143559 T-GATACTATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGGATTCCTCCGGATC 143617 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 |||||||| | || | ||| || || || ||||| || | | || |||||||||| | Sbjct 143618 AGCAGAGATTGATCTTTGCAGGGAAGCAACTGGAAGATGGGAGGACTCTGGCGGACTATA 143677 Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758 ||||||| |||||||| || |||| Sbjct 143678 ACATTCAGAAGGAGTCAACCCTGCA 143702 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||| ||||| ||||| | || ||||| ||||| || ||||| ||| ||| Sbjct 148164 AATGCAAATCTTTGTGAAAACCCTGACCGGCAAGACCATCACGCTCGAAGTTGAGAGCTC 148223 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 |||||| | | | || || |||||| || || || || | || ||||| Sbjct 148224 T-GATACTATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGGATTCCTCCGGATC 148282 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 |||||||| | || | ||| || || || ||||| || | | || |||||||||| | Sbjct 148283 AGCAGAGATTGATCTTTGCAGGGAAGCAACTGGAAGATGGGAGGACTCTGGCGGACTATA 148342 Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758 ||||||| |||||||| || |||| Sbjct 148343 ACATTCAGAAGGAGTCAACCCTGCA 148367 >seq2546035 Length=46904 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| || || || ||||| |||||| | || |||| ||| Sbjct 8982 ATGCAGATCTTTGTGAAAACCTTGACTGGGAAAACTATTACCTTGGAGGTGGAGAGCTCT 8923 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| ||||| || || | ||| || || Sbjct 8922 -GACACCATTGATAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCCCCCGACCA 8864 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || |||| ||| ||||| |||||||| || | || |||| || || || Sbjct 8863 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACTCTGGCTGATTATAA 8804 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || ||||||||||| ||||| |||| Sbjct 8803 CATCCAGAAGGAGTCTACTCTGCACCTGGT 8774 >seq2282228 Length=14079 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| || || || ||||| |||||| | || |||| ||| Sbjct 1520 ATGCAGATCTTTGTGAAAACCTTGACTGGGAAAACTATTACCTTGGAGGTGGAGAGCTCT 1579 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| ||||| || || | ||| || || Sbjct 1580 -GACACCATTGATAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCCCCCGACCA 1638 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || |||| ||| ||||| |||||||| || | || |||| || || || Sbjct 1639 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACTCTGGCTGATTATAA 1698 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||| || ||||||||||| ||||| |||| Sbjct 1699 CATCCAGAAGGAGTCTACTCTGCACCTGGT 1728 >seq2052140 Length=98983 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| || || || |||||||| ||||| || | || ||| ||| Sbjct 16185 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACCATCACACTGGAGGTTGAGAGCTCT 16126 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || || ||||||| || || ||||| | || ||||| Sbjct 16125 -GATACAATTGATAACGTGAAGGCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCA 16067 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || |||| ||| || || ||||||||||| | ||| |||| || || || Sbjct 16066 GCAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGAACTCTGGCCGATTATAA 16007 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| |||||||| || | ||| | || ||| Sbjct 16006 CATTCAGAAGGAGTCCACCCTCCACCTTGTCTTG 15973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384130878394858