Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3012833 98.7 2e-15 seq2297319 95.1 2e-14 seq1859312 93.3 6e-14 seq1835634 91.5 2e-13 seq2852841 89.7 8e-13 seq1180450 84.2 3e-11 >seq3012833 Length=100759 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||| || || || || || |||||||| | || || || | Sbjct 36758 TGCAAATATTTGTAAAGACCTTGACTGGCAAGACAATTACACTAGAGGTTGAGAGCTCTG 36817 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | |||||||| ||| || ||| || ||||| ||||| || ||||| | Sbjct 36818 ATACGATTGATAATGTAAAGGCTAAGATTCAAGACAAGGAAGGAATTCCCCCTGATCAGC 36877 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || |||||||||||||| || || | || ||| |||| | | ||||| |||| Sbjct 36878 AGAGGCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGAACCCTTGCTGATTACAATA 36937 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || ||||| || |||| | || ||||| Sbjct 36938 TTCAGAAGGAATCCACCCTCCACCTTGTCTTACG 36971 >seq2297319 Length=28675 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || ||||| || ||||| || || ||| | || ||||| | | Sbjct 19256 TGCAGATATTTGTGAAGACATTGACTGGAAAGACTATAACTCTGGAGGTAGAGGGTTCTG 19315 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| || || ||| || ||||||||||| || ||||| | Sbjct 19316 ACACGATTGATAATGTGAAAGCCAAGATTCAAGACAAGGAAGGCATTCCTCCTGATCAGC 19375 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || ||||||| ||||| || || || || || ||| | || | | ||||| |||| Sbjct 19376 AACGACTCATATTTGCTGGAAAGCAGTTGGAGGATGGACGGACCCTTGCTGATTACAATA 19435 Query 146212 TACAAAAAGAATCGACT 146228 | ||||| ||||| ||| Sbjct 19436 TCCAAAAGGAATCCACT 19452 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| || || | ||||| |||| || || ||||||||| |||| || || | | | Sbjct 19712 TGCAGATCTTTGTCAAAACTCTAACTGGGAAGACAATTACTCTTGAGGTTGAGAGCTCA- 19770 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | |||||||| ||||| ||| || ||||| ||||| || ||||| Sbjct 19771 GATACCATCAACAATGTAAAGGCCAAAATTCAAGACAAGGAAGGAATTCCCCCAGATCAG 19830 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| || || || | || ||| |||| || | | ||||||||| Sbjct 19831 CAGAGATTGATCTTTGCTGGAAAGCAGCTTGAAGATGATAGGACTCTGGCTGATTATAAT 19890 Query 146211 ATACAAAAAGAATCGAC 146227 || || || ||||| || Sbjct 19891 ATCCAGAAGGAATCCAC 19907 >seq1859312 Length=199636 Score = 93.3 bits (102), Expect = 6e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||||| || || || || ||||| || || ||| |||| || || | Sbjct 29272 TGCAGATATTCATGAAGACGTTGACCGGAAAGACCATAACTCTTGAGGTTGAGAGCTCTG 29331 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||| || || || ||||| ||||| || ||||||| Sbjct 29332 ATACGATTGATAATGTCAAGGCTAAGATTAAAGACAAGGAAGGTATTCCTCCTGATCAAC 29391 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || || || || ||| | |||| | |||||||| | Sbjct 29392 AGAGGCTCATTTTTGCGGGCAAGCAGTTGGACGATGGTCGAACCCTTGTCGATTATAAAA 29451 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 29452 TTCAGAAGGAATCTAC 29467 >seq1835634 Length=113921 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | || ||||| || |||| || || ||| |||| || || || | Sbjct 54320 TGCAGATATTCGTGAAGACATTGACCAGAAATACCATAACTCTTGAGGTTGAG-ATCTCT 54378 Query 146092 -ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||| ||| | || || || ||| || ||| || ||||| ||||| || |||||| Sbjct 54379 TATATGATTGATAACGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 54438 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||| |||||||||| || ||||| || || ||| |||| || | |||||||| Sbjct 54439 CAAAGGCTCATTTTTGTGGGAAAACAGTTGGAGGATGGCTGAACCTTCGCCGATTATAAC 54498 Query 146211 ATACAAAAAGAATCGAC 146227 || || || ||||| || Sbjct 54499 ATTCATAAGGAATCTAC 54515 >seq2852841 Length=1350 Score = 89.7 bits (98), Expect = 8e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| |||||| | || ||||| || ||||| || || ||| |||| || || | | | Sbjct 737 TGCAGATATTCGTGAAGACATTGACCGGAAAGACCATAACTCTTGAGGTGGAGAGCTCA- 795 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| || || || || || || || ||||| || ||||| Sbjct 796 GATACTATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAG 855 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || ||||||||||| || ||||| | || ||| |||| | |||||||| | Sbjct 856 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAACCCTCGCAGATTATCAC 915 Query 146211 ATACAAAAAGAATCGACT 146228 || || || ||||| ||| Sbjct 916 ATTCAGAAGGAATCTACT 933 >seq1180450 Length=1488 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || || || ||||| || ||||| || | | || |||||||| ||||| |||| ||| Sbjct 1339 AAGGAGGGTATTCCTCCAGATCAGCAGCGCTTAATATTTGCAGGAAAACAGCTAGAAGAT 1398 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | |||| || ||||||||||||| || || ||||| ||| | || || || || || Sbjct 1399 AGGCGAACTCTAGCAGATTATAATATTCAGAAGGAATCAACTCTTCACTTGGTTTTGCGG 1458 Query 146247 TTAAGAGGAGG 146257 ||||| ||||| Sbjct 1459 TTAAGGGGAGG 1469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 756357702040240