Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq2065080 134 2e-26 >seq2065080 Length=53610 Score = 134 bits (148), Expect = 2e-26 Identities = 249/363 (69%), Gaps = 2/363 (1%) Strand=Plus/Minus Query 71290 AAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTAT 71349 ||||| |||| || ||||| ||||| | || || | ||||| | || | ||| Sbjct 23065 AAAAATGATCCTTTGCAAGAACCAATGTTTTTTGGACAACCAGTTAATATTTCCAGATAT 23006 Query 71350 GATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGG 71409 ||||| || || || || ||||| | || || ||||||||||| || || ||| Sbjct 23005 GATCAACAAAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTTCTTTTTTTTGG 22946 Query 71410 CGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCAT 71469 |||||||||| | ||| | || |||| || || || || | |||||| | ||| Sbjct 22945 AGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATTTGCCAAAACAT 22886 Query 71470 GAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGT 71529 ||||||||||| || | ||| | ||||| |||||| | || || || ||||| || Sbjct 22885 GAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATTCAATTCAAGGA 22826 Query 71530 CGTAGCCCGAACGTGGCCTTGCTGCCGATCTGT-TCTATCCCGGAACTCGAAACCTGGAT 71588 | || || || | || || |||| | ||| || || || ||| | ||||| ||||| Sbjct 22825 AGAAGTCCAAATATAGCTTTTTTGCCTGT-TGTATCAATACCTGAATTAGAAACATGGAT 22767 Query 71589 TGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCATACACCCACATCATCCGTAA 71648 |||||| ||| | || |||||||| || || || || || || || || || || || || Sbjct 22766 TGAAACTTGGTCATTTTCTGAAACTATACATTCTCGATCTTATACTCATATAATTCGAAA 22707 Query 71649 TAT 71651 || Sbjct 22706 CAT 22704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 834454250873280