Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq2065080 143 3e-29 >seq2065080 Length=53610 Score = 143 bits (158), Expect = 3e-29 Identities = 295/439 (67%), Gaps = 10/439 (2%) Strand=Plus/Plus Query 145943 TTGATTTGAACACCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 146002 || ||||| | | ||||||| | || | | ||| || || |||| ||| | || || Sbjct 24403 TTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTT 24462 Query 146003 TTGAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAATGTCGCCGCG 146062 || | || | | || || ||||| || ||||| || ||||| ||| || || || Sbjct 24463 TTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCA 24522 Query 146063 CCACCGCGAACTCCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 146122 || || | |||||||||||| ||||| || ||||| || ||||| | ||||| ||||| Sbjct 24523 CCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAA 24582 Query 146123 GGAATAACTCCAGTATG-----CTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCAC 146177 || ||| |||||||| ||| | || | || || || || | |||| Sbjct 24583 GGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGA-----CAGCAC 24637 Query 146178 GAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATT 146237 |||| ||| | ||||| || || || || | || ||| | || | ||| ||||| Sbjct 24638 GAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAAC 24697 Query 146238 CAGCAGATTTGTTAATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGA 146297 ||| | | ||||| || | | |||| || |||||| | ||| ||||| || | Sbjct 24698 TAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAA 24757 Query 146298 ATTGACGAGTAGGAGTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTTCTTAG 146357 |||| | ||||||||| | ||||||||||||| || || || ||||| ||| | || Sbjct 24758 ATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAG 24817 Query 146358 TTGACACAGCATCGTAAAA 146376 | || | ||| || ||||| Sbjct 24818 TAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533335977200320