Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq2065080 149 1e-30 >seq2065080 Length=53610 Score = 149 bits (164), Expect = 1e-30 Identities = 258/371 (70%), Gaps = 8/371 (2%) Strand=Plus/Minus Query 78662 TACCGACACCGATTATGGCAGGCGTTCGTACCCCGACACGCCAGTTTAGTTCGTGTGTTA 78721 |||| ||||||||||||||||| || | || || || | || ||||| || |||||| Sbjct 24802 TACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTT 24743 Query 78722 AGATTGAATCAGGCGACTCTTTGCATTCAATCAATGAAGTGGCTAAATCAATTGTAAGTT 78781 ||||||| | || ||| |||| || |||| | |||| ||||| |||| | Sbjct 24742 TAATTGAATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAAT 24683 Query 78782 ACATTAGTAAGCGTGCAGGTATCGGTGTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAG 78841 | | | | | ||||| || || |||| | || |||||||||| || || Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGA--AG 24625 Query 78842 TCGT--TCGTTCAGGTGAG--ATTCGTCACACTGGTGTAATTCCATTCTGGAAACACTTT 78897 || | | | ||| || ||| ||| |||||| || || |||| ||||| ||| Sbjct 24624 TCCTATTAGAGGAGGGGAAGCATT--TCATACTGGTTGTATACCTTTCTACAAACATTTT 24567 Query 78898 CAAACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGGGGTGCTGCGACTCTAACT 78957 |||||||| |||||||| || ||||||||||| || | || |||||||| ||||| | Sbjct 24566 CAAACTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTT 24507 Query 78958 TACCCGATTTGGCACTTAGAAGTTGAAAAACTGTTAGTTCTGAAGAACAACAAAGGTGTT 79017 || || |||||||| |||||||| || || |||||||| | || || || | ||| | Sbjct 24506 TATCCTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATA 24447 Query 79018 GAAGAAAACCG 79028 ||||| || || Sbjct 24446 GAAGATAATCG 24436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 760196799938880