Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq2065080 163 4e-35 >seq2065080 Length=53610 Score = 163 bits (180), Expect = 4e-35 Identities = 307/448 (69%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 32811 TTTATTGATTTGGATACCGTAGTCCAAGTGTCTGATTCGATTTTCTTCCACACCCTTGTT 32870 |||||| ||||| ||| |||| || | ||||| | |||||| ||||| | || | || Sbjct 24399 TTTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATT 24458 Query 32871 GTTCTTGAGCACAAGGATTTTTTCAACTTCAAGATGCCACATCGGATAATACAGAGTAGC 32930 || || | || | | || || ||||| | |||||| || |||||| |||||||||| Sbjct 24459 ATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGC 24518 Query 32931 AGCGCCACCACGTACACCGCCCTGTGAGCAGCTTTTTACCGCAGTCTGAAAGTATTTCCA 32990 ||| || || | || || || || |||||| ||| || ||||| ||||| | ||| | Sbjct 24519 AGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTA 24578 Query 32991 GAATGGGATAATACCAGTATGACGAACCTCGCCAGAACGAATTCTAGAGCCTTCAGCACG 33050 ||| || ||| |||||||||| | || || | ||| | || ||||||| Sbjct 24579 GAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACG 24638 Query 33051 AATAGCACCACCATTGATACCGATACCAGCTCTCTTGCTGAT--ATAGTCAACGATAGAA 33108 ||| || |||| || || || || ||||| ||| ||| ||| | || || ||| Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCT-TTG-AGATACATATTTTACTATTGAA 24696 Query 33109 CTAGCGGTTGCGTTAATGCTATCGAGTTCATCACCACTTTCAATCTTGACGCATGAGCTA 33168 ||||| ||||| ||||| ||| | | |||| ||| |||||| || || |||||| Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756 Query 33169 AACTGACGGGTCGGAGTACGAACACCAGCCAGAATAGGAGTCGGAAGACTCAGCTTGCCA 33228 || || | || ||||| | ||||| |||| ||| || || || ||| | | | Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAA 24816 Query 33229 AGAGAAGTGACGTCATAAAAGTTTTTAA 33256 |||| | |||||||||| ||||||| Sbjct 24817 GTAGAAATAGCGTCATAAAATTTTTTAA 24844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 683359425957920