Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq2065080 167 2e-36 >seq2065080 Length=53610 Score = 167 bits (184), Expect = 2e-36 Identities = 303/441 (69%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 27215 TTTTATGATGCCGTTTCTACTCATCAAGTTTCATTGCCTACTCCAATTATGGCAGGTGCT 27274 |||||||| || |||||||| | | | || | || || || ||||||||||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 27275 CGTACTCCAACTCGCCAGTTCTCTAG---TTGTGTAGTTATTGAAGCCGGTGATTCGTTA 27331 | ||||| ||| | || || ||| |||||| | |||||| | |||| ||| Sbjct 24776 AGAACTCCTACTAGGCAATT---TAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720 Query 27332 AAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTATA 27391 | |||||||| ||| | ||||| | ||||| | ||| || |||| || || Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 27392 GGTATCAACGTTGGTATGCTTCGTGCAGAAGG---TTCTAAGATCGGTATGGGTGAAGTT 27448 || || || || || ||||||| | || | ||| | || || | | || Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 27449 CGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCT 27508 | |||| ||| ||| || |||| |||||||| |||||||| || ||||| || ||| Sbjct 24599 C---ATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCT 24543 Query 27509 CAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTA 27568 |||||||| || | || ||||||||||| || |||||| || ||||| ||||||||| Sbjct 24542 CAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTA 24483 Query 27569 GAGAACCTATTAGTTCTGAAAAATAATAAAGGTGTGGATGAAAACCGTATTCGACATATG 27628 ||||| | |||||| | |||||||||| ||| | || || || || | ||||| | Sbjct 24482 GAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTA 24423 Query 27629 GACTACGGAATTCAGATTAAT 27649 || |||| || || |||||| Sbjct 24422 GATTACGCTATACAAATTAAT 24402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520627239328960