Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_024125.2
Length=168470
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 188 7e-43
>seq2065080
Length=53610
Score = 188 bits (208), Expect = 7e-43
Identities = 319/461 (69%), Gaps = 6/461 (1%)
Strand=Plus/Plus
Query 140761 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 140820
||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | |||||
Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461
Query 140821 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 140880
||| ||||| | | ||| || ||||| |||||||||||||||||| | |||||||||
Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521
Query 140881 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAA 140940
|| || | || |||||| || || || |||||||||||||| ||||||||||| | ||
Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581
Query 140941 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAAT 141000
||| ||| ||||||||| | |||| || | ||| | || ||||||||||
Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641
Query 141001 CATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA---AGC 141057
|| || ||||| |||||||| || | || ||| | ||||| || ||||| |||
Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGC 24701
Query 141058 GGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACTAAA 141117
| || ||| ||||| | || ||| | ||||| | |||||| || |||||
Sbjct 24702 TGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758
Query 141118 CTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCGAGT 141177
|| | ||| ||||| | ||| |||||||| || ||||| | || || |||
Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGT 24818
Query 141178 AGATACTGCTTCATAAAAACGAATAACATGTTTTAATCTAT 141218
||| | || |||||||| ||| || | ||||||||
Sbjct 24819 AGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTAT 24859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518539903021600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |