Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_024794.1 Length=167318 Score E Sequences producing significant alignments: (Bits) Value seq2065080 161 1e-34 >seq2065080 Length=53610 Score = 161 bits (178), Expect = 1e-34 Identities = 302/441 (68%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 141890 ATTAATCTGAATTCCGTAGTCCATATGTCGAATACGGTTTTCATCCACACCTTTGTTATT 141949 |||||| || || |||| || | ||||| | || || || || | ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 141950 TTTCAGAACTAATAGGTTCTCTACTTCTAAGTGCCACATCGGATAATACGCTGTAGCAGC 142009 ||| | |||||| | |||||||||||||| ||||| || |||||| || |||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 142010 ACCGCCGCGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAA 142069 ||| || | || ||||||||||| || ||||| || |||||||| |||||||| |||| Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 142070 TGGAATAACACCTGTATGTCGAACTTCACCCATACCGATCTTAGAA---CCTTCTGCACG 142126 || ||| ||| |||| ||| | | || || | ||| | || | ||||| Sbjct 24582 AGGTATACAACCAGTAT---GAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACG 24638 Query 142127 AAGCATGCCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCGATAATTGATGC 142186 || || || || || || || || |||| || ||| | ||||| | ||||| Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698 Query 142187 TGAAGTTTTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAA---CTAGA 142243 | ||| |||||||| | ||| |||| | |||||| | |||||| ||| Sbjct 24699 AGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA-- 24756 Query 142244 GAACTGGCGAGTCGGAGTACGAGCACCTGCCATAATTGGAGTAGGCAATGAAACTTGATG 142303 || || | ||| ||||| | ||||||||||||| || || || | || | | | Sbjct 24757 -AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAA 24815 Query 142304 AGTAGAAACGGCATCATAAAA 142324 |||||||| || |||||||| Sbjct 24816 AGTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514993278499360