Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_025447.1
Length=348532
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 167 5e-36
>seq2065080
Length=53610
Score = 167 bits (184), Expect = 5e-36
Identities = 389/579 (67%), Gaps = 6/579 (1%)
Strand=Plus/Minus
Query 24223 TATGTTAAAAAGTTTTATGACGCAGTAAGTAATTTTGACATCAGTCTTCCAACACCTATT 24282
||| ||||||| ||||||||||| | || |||| || ||| |||||||| |||
Sbjct 24848 TATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATT 24789
Query 24283 ATGGCAGGTCTACGTACTAACACACGTCAGTTTAGTTCTTGTGTAGTACT-GAACGTTGG 24341
||||||||| || | ||| || | || ||||| |||||||| || | ||| || |
Sbjct 24788 ATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGT-GC 24730
Query 24342 TGATAGTTTAGATAGTATTGGTTCATCAAATCACGCCATTCTACGCTATATCTCACGTAA 24401
||||| ||||||| |||| | || || | | || || ||| | || | |
Sbjct 24729 TGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAG 24670
Query 24402 AGCTGGACTAGGTATTAATATGGGCCGTATTCGTGCTCTAGACTCTGAGATTCGTTCAGG 24461
||| ||| | || |||||| | || | ||||||||| | | | ||| | |||
Sbjct 24669 AGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGG 24610
Query 24462 TGATGCAGTACATACTGGGTTGATTCCTTTTATCGCAGCAACTGCTAAGACC-GTTAAAA 24520
|| ||| | |||||||| | || ||||| | | || | | || | ||||||
Sbjct 24609 GGAAGCATTTCATACTGGTTGTATACCTTTCTACAAA-CATTTTCAAACTGCTGTTAAAT 24551
Query 24521 GCTGCTCACAGGGTGGTGTGCGTGGTGGTGCAGCAACTGTTCACT-TCCCATTGTGGCAT 24579
|||||| || ||||| || | || ||||| || ||| | | ||| ||| ||||||
Sbjct 24550 CCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATT-TGGCAT 24492
Query 24580 TTGGAGTTTGATAACCTAGTAGTACTTAAAAATAACAAAGGTACAGAGTTTAACCGTGTA 24639
|| || | || || | |||| | |||||||| | ||| | ||| ||| || |||
Sbjct 24491 TTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTA 24432
Query 24640 CGTCAACTAGACTATTGTTTCCAAGTAAACAAAACTTTATATCAACGTTTGGTTGATGGA 24699
| || |||| || | | ||| | || ||| ||||||||| | || | | ||
Sbjct 24431 AGACATGTAGATTACGCTATACAAATTAATAAATTATTATATCAAAGAATGTTATCTAGA 24372
Query 24700 AAGAACATTACATTCTTTAGTCCTAATGAAGTTCCTGGGCTATATGAAGCATTCTGTTCT 24759
|| || |||| || ||||||||| ||| |||||| |||||||| || | ||||
Sbjct 24371 AAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTTTTTTTCT 24312
Query 24760 GACCAAAAAGAATTTGAAAAACTATATAAAAAATACGAA 24798
||||||| | |||||||| |||||||| |||||| |||
Sbjct 24311 GACCAAATAAAATTTGAAGAACTATATGTAAAATATGAA 24273
Score = 107 bits (118), Expect = 4e-18
Identities = 325/488 (67%), Gaps = 18/488 (4%)
Strand=Plus/Minus
Query 25371 AGGTATTCTTCCAATTGATACTTATAAATCTGACATTGATGAATTAGTAACTAAAGAACT 25430
|||| | || |||||||||||||||||| ||| |||||| || | || | ||||
Sbjct 23697 AGGTTTACTACCAATTGATACTTATAAAAGTGAAATTGAT--ATCA-TATGCGACGAACC 23641
Query 25431 AAAACA---AGATTGGGAATCCTTACGTGAAGA--TATCAAAGAATATGGTATTCGTAAC 25485
| || | | ||||||| ||| | || | ||||||| ||||||| | | |||
Sbjct 23640 ATTGCATTTAAACTGGGAATTTTTAAGAAAAAAAATATCAAA--ATATGGTTTAAGAAAC 23583
Query 25486 GCAACAACAATGGCATTAATGCCAGCAGAAACAAGTGCACAAATCAGTAACAGTACTAAT 25545
| ||| | || | ||||| |||||||| | | ||||| || ||||||
Sbjct 23582 TCTACACTATCTGCTATTATGCCTTCAGAAACATCTTCTCAAATATCAAATGCAACTAAT 23523
Query 25546 GGTATTGAAAAGCCACGTTCTCTTGTAACTAAGAAACTATCTAAGGATGGTATTCTTAAA 25605
|| || || || | || | | || ||| |||||| |||||||| ||||||
Sbjct 23522 GGAATAGAGCCTCCTAGAGGATTTATTAGTATAAAAGCATCTAAAGATGGTATGCTTAAA 23463
Query 25606 CAAGTAGTTCCAGAA-ATCAATAAGTTGAAAAACAAA-TATGATTTACTATGGGATCAGA 25663
||||| ||||| ||| || || || | |||| |||| ||||| ||| ||||||||
Sbjct 23462 CAAGTTGTTCCCGAATATAAAAAACT--AAAATCAAAGTATGAATTATTATGGGATATAC 23405
Query 25664 AAGATAACATTGGTTATCTACAAATCTGTGGTGTTCTACAAAAATACATTGACCAAAGTA 25723
||||| || || ||||| || | |||| || | ||||||| |||| ||| |
Sbjct 23404 CGGATAATATCGGATATCTTAAATTAGTTGGTATTATGCAAAAATTTGTTGATCAATCAA 23345
Query 25724 TCAGTGTTAATACTAGCTATAACCCAATACACTTCCCTGATGGTAAGTTGCCAATGTCAA 25783
| | |||||||| ||| | ||| | | || || ||||| || | || ||| ||
Sbjct 23344 TTTCTACTAATACTAATTATGATCCATCAAAATTTCCAGATGGAAAAATTCCGATG-AAA 23286
Query 25784 CTCTT-CTAACTGAACTTATGTA-TGCATATAAGGTTGGTTTGAAAAATCTTTATTATCA 25841
| || |||| | | |||| | ||| |||||| | || | |||| | | ||||||||
Sbjct 23285 TTATTACTAAAAG-ATTTATTAACTGCTTATAAGTTAGGAATAAAAACTTTATATTATCA 23227
Query 25842 TAATACCA 25849
|||||||
Sbjct 23226 AAATACCA 23219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071830697898818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |