Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_025449.1 Length=166783 Score E Sequences producing significant alignments: (Bits) Value seq2065080 178 1e-39 >seq2065080 Length=53610 Score = 178 bits (196), Expect = 1e-39 Identities = 307/445 (69%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 138633 TAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 138692 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 138693 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 138752 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 138753 CCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 138812 || || || || |||||||| ||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 138813 TGACGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAATCATACCAACGTTAATA 138872 ||| | |||| || | ||| | || |||||||||| || || ||||| Sbjct 24598 TGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTAATT 24657 Query 138873 CCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA---AGCGGAAGCCTTATTGATA 138929 |||||||| || | || ||| | ||||| || ||||| ||| | || ||| ||| Sbjct 24658 CCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGC---ATTAATA 24714 Query 138930 GACTTCAGCGAATCACCTGCCTCAATAACAACGCATGAACTGAACTGTCGAGTCGGAGTA 138989 || | | |||| | ||||| | ||| || || || || || | ||| ||||| Sbjct 24715 GAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGAGTT 24774 Query 138990 CGACAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCGAGTAGATACTGCTTCATAA 139049 | ||| |||||||| || ||||| | || || |||||| | || |||||| Sbjct 24775 CTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCATAA 24834 Query 139050 AAACGAATAACATGTTTTAATCTAT 139074 || ||| || | |||||||| Sbjct 24835 AATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513346191590160