Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq2065080 196 5e-45 >seq2065080 Length=53610 Score = 196 bits (216), Expect = 5e-45 Identities = 311/445 (70%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 143830 TAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAAACGAGAAGA 143889 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 143890 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 143949 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 143950 CCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 144009 || || || || |||||||| ||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 144010 TGACGCACTTCACCCATTCCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 144066 ||| |||| || ||| | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 144067 ATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCCTTATTGATA 144126 || |||||||| || | || || | ||||| || |||||| || | ||| ||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGCATTAATA 24714 Query 144127 GACTTTAATGAATCACCTGCCTCAATAACAACGCATGAACTAAACTGCCGAGTTGGAGTA 144186 || | ||| |||| | ||||| | ||| || || ||||| |||| ||| ||||| Sbjct 24715 GAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGAGTT 24774 Query 144187 CGGCAACCAGCCATAATAGGGGTTGGCAGTGAAATCTGTCGAGTAGATACTGCTTCATAA 144246 | ||| |||||||| || ||||| || || || |||||| | || |||||| Sbjct 24775 CTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCATAA 24834 Query 144247 AAACGAATAACATGTTTTAATCTAT 144271 || ||| || | |||||||| Sbjct 24835 AATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507853849448080