Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2608542 91.5 1e-13
seq2549946 86.0 6e-12
seq1935421 86.0 6e-12
seq2819260 84.2 2e-11
>seq2608542
Length=63827
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || || ||||| |||||||| | ||| || |||||||||||| || || | |
Sbjct 1184 GATTCCTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 1125
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| || ||||| || |||||||||||||| || || || ||||
Sbjct 1124 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCCTTCACG 1065
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||| ||||| | || | ||| |||||||| || |||||
Sbjct 1064 TTGTCGATGGTGTCCGAGCTCTCAACTTCCAAAGTAATCGTCTTACCAGTGAGGGTTTTA 1005
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 1004 ACGAAGATCTGCATG 990
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || || ||||| |||||||| | || || |||||||||||| || || | |
Sbjct 52639 GATTCCTTCTGAATATTGTAGTCAGCAAGAGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 52580
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| || ||||| || ||||||||||| || || || || ||||
Sbjct 52579 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 52520
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||| ||||| | || | ||| |||||||| || |||||
Sbjct 52519 TTGTCGATGGTGTCCGAACTCTCAACTTCTAAAGTAATCGTCTTACCAGTGAGGGTTTTA 52460
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 52459 ACGAAGATCTGCATG 52445
>seq2549946
Length=35353
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||| | ||| | | | ||||| || |||||||| ||||| || || | | ||||||
Sbjct 27598 AACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAAAGTCCTCCCATCTTC 27657
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
|| || || || | | |||||| | ||| ||||| ||||| || || || |||||
Sbjct 27658 AAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 27717
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || |||| | || | |||||||| || ||||||| ||| | || ||
Sbjct 27718 AATCTTCGCCTTCACATTATCAATAGTATCGGAGTTTTCAACTTCGAGCGTGATGGTCTT 27777
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||||||||| | || || |||||
Sbjct 27778 GCCAGTCAGAGTTTTCACAAAGATTTGCAT 27807
>seq1935421
Length=88102
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||| | ||| | | | ||||| || |||||||| ||||| || || | | ||||||
Sbjct 2895 AACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAAAGTCCTCCCATCTTC 2954
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
|| || || || | | |||||| | ||| ||||| ||||| || || || |||||
Sbjct 2955 AAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 3014
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || |||| | || | |||||||| || ||||||| ||| | || ||
Sbjct 3015 AATCTTCGCCTTCACATTATCAATAGTATCGGAGTTTTCAACTTCGAGCGTGATGGTCTT 3074
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||||||||| | || || |||||
Sbjct 3075 GCCAGTCAGAGTTTTCACAAAGATTTGCAT 3104
>seq2819260
Length=3103
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| || | ||||| || | | | || || ||||| ||||||||||| || ||| ||
Sbjct 3068 CAAACGGAGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCCAGGGTTCG 3009
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||| |||||||| ||||||| | |||| || | ||| || ||||| || || |||||
Sbjct 3008 GCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATCCCTTC 2949
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||| || || | | || | || || | ||| ||||||| ||
Sbjct 2948 CTTATCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACTTCGAGAGT 2889
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || ||||| || ||||| | || ||||||||
Sbjct 2888 GATTGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 2850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458539759519920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |