Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2608542 91.5 1e-13 seq2549946 86.0 6e-12 seq1935421 86.0 6e-12 seq2819260 84.2 2e-11 >seq2608542 Length=63827 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||| |||||||| | ||| || |||||||||||| || || | | Sbjct 1184 GATTCCTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 1125 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || ||||| || |||||||||||||| || || || |||| Sbjct 1124 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCCTTCACG 1065 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| ||||| | || | ||| |||||||| || ||||| Sbjct 1064 TTGTCGATGGTGTCCGAGCTCTCAACTTCCAAAGTAATCGTCTTACCAGTGAGGGTTTTA 1005 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 1004 ACGAAGATCTGCATG 990 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||| |||||||| | || || |||||||||||| || || | | Sbjct 52639 GATTCCTTCTGAATATTGTAGTCAGCAAGAGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 52580 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || ||||| || ||||||||||| || || || || |||| Sbjct 52579 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 52520 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| ||||| | || | ||| |||||||| || ||||| Sbjct 52519 TTGTCGATGGTGTCCGAACTCTCAACTTCTAAAGTAATCGTCTTACCAGTGAGGGTTTTA 52460 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 52459 ACGAAGATCTGCATG 52445 >seq2549946 Length=35353 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || |||||||| ||||| || || | | |||||| Sbjct 27598 AACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAAAGTCCTCCCATCTTC 27657 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || || || | | |||||| | ||| ||||| ||||| || || || ||||| Sbjct 27658 AAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 27717 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | |||||||| || ||||||| ||| | || || Sbjct 27718 AATCTTCGCCTTCACATTATCAATAGTATCGGAGTTTTCAACTTCGAGCGTGATGGTCTT 27777 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | || || ||||| Sbjct 27778 GCCAGTCAGAGTTTTCACAAAGATTTGCAT 27807 >seq1935421 Length=88102 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || |||||||| ||||| || || | | |||||| Sbjct 2895 AACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAAAGTCCTCCCATCTTC 2954 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || || || | | |||||| | ||| ||||| ||||| || || || ||||| Sbjct 2955 AAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 3014 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | |||||||| || ||||||| ||| | || || Sbjct 3015 AATCTTCGCCTTCACATTATCAATAGTATCGGAGTTTTCAACTTCGAGCGTGATGGTCTT 3074 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | || || ||||| Sbjct 3075 GCCAGTCAGAGTTTTCACAAAGATTTGCAT 3104 >seq2819260 Length=3103 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || | ||||| || | | | || || ||||| ||||||||||| || ||| || Sbjct 3068 CAAACGGAGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCCAGGGTTCG 3009 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| |||||||| ||||||| | |||| || | ||| || ||||| || || ||||| Sbjct 3008 GCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATCCCTTC 2949 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| ||| || || | | || | || || | ||| ||||||| || Sbjct 2948 CTTATCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACTTCGAGAGT 2889 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||| || ||||| | || |||||||| Sbjct 2888 GATTGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 2850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458539759519920