Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1637366 87.8 2e-12 seq565282 87.8 2e-12 seq2052140 84.2 2e-11 seq2990797 82.4 7e-11 seq2886078 82.4 7e-11 seq2297319 82.4 7e-11 >seq1637366 Length=2671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA-AGCCAA 25233 |||||| | ||||| |||||| | || || || | |||||| | ||||| || ||| | Sbjct 1393 ATGCAAATCTTTGTCAAAACACTGACGGGCAAGACAATCACGCTTGAAGTTGAGAGCTCA 1334 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || | ||| || | || || ||| ||| ||||| ||||| || || |||||||| Sbjct 1333 -GACATTATTGATAACGTGAAGGCAAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 1275 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACA 25352 ||||||| | || | | || || ||||| ||| ||| || | | | ||| || |||| Sbjct 1274 GCAAAGATTGATCTTTGCAGGGAAGCAACTTGAAAATGGGAGGACTCT-AGCAGACTACA 1216 Query 25353 ATATTCAAAAAGAATCCAC 25371 | |||||||| ||||| || Sbjct 1215 ACATTCAAAAGGAATCTAC 1197 >seq565282 Length=2859 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA-AGCCAA 25233 |||||| | ||||| |||||| | || || || | |||||| | ||||| || ||| | Sbjct 1467 ATGCAAATCTTTGTCAAAACACTGACGGGCAAGACAATCACGCTTGAAGTTGAGAGCTCA 1526 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || | ||| || | || || ||| ||| ||||| ||||| || || |||||||| Sbjct 1527 -GACATTATTGATAACGTGAAGGCAAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 1585 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACA 25352 ||||||| | || | | || || ||||| ||| ||| || | | | ||| || |||| Sbjct 1586 GCAAAGATTGATCTTTGCAGGGAAGCAACTTGAAAATGGGAGGACTCT-AGCAGACTACA 1644 Query 25353 ATATTCAAAAAGAATCCAC 25371 | |||||||| ||||| || Sbjct 1645 ACATTCAAAAGGAATCTAC 1663 >seq2052140 Length=98983 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA-AGCCAA 25233 |||||| | ||||| ||||| | ||||| || | ||||| | ||||| || ||| | Sbjct 16413 ATGCAAATCTTTGTCAAAACCCTGACCGGCAAGACAATCACACTTGAAGTTGAGAGCTCA 16354 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| || | || || || ||| ||||| ||||| || || |||||||| Sbjct 16353 -GACACTATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 16295 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACA 25352 ||| ||| | || | | || || ||||| ||||||| || | | | ||| || |||| Sbjct 16294 GCAGAGATTGATCTTTGCAGGGAAGCAACTTGAAGATGGGAGGACTCT-AGCGGACTACA 16236 Query 25353 ATATTCAAAAAGAATCCAC 25371 | |||||||| ||||| || Sbjct 16235 ACATTCAAAAGGAATCTAC 16217 >seq2990797 Length=389299 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| || || || ||| ||||||| | ||||| || | | Sbjct 336582 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 336641 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | |||||| || ||| || || || || || || || |||||| Sbjct 336642 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 336701 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || || | | || || || || || |||| ||| | || |||||||||| Sbjct 336702 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 336761 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || || || || || |||| Sbjct 336762 ATCCAGAAGGAGTCTACACTTCA 336784 >seq2886078 Length=74263 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| || || || ||| ||||||| | ||||| || | | Sbjct 36856 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 36915 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | |||||| || ||| || || || || || || || |||||| Sbjct 36916 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 36975 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || || | | || || || || || |||| ||| | || |||||||||| Sbjct 36976 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 37035 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || || || || || |||| Sbjct 37036 ATCCAGAAGGAGTCTACACTTCA 37058 >seq2297319 Length=28675 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || ||||| || | ||||| | ||||| || | Sbjct 19939 ATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACTATCACTCTTGAAGTTGAGAGCTCG 19998 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || || || ||| ||||| ||||| || || || |||||| Sbjct 19999 GATACAATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAGGGGATTCCTCCAGATCAG 20058 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | | || |||||||||||||||| || | | | ||||||||| Sbjct 20059 CAGAGATTGATCTTTGCTGGGAAACAACTCGAAGATGGAAGGACTCTTGCAGATTACAAT 20118 Query 25355 ATTCAAAAAGAATCCACC 25372 ||||| || ||||| ||| Sbjct 20119 ATTCAGAAGGAATCTACC 20136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428642959579106