Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1891445 127 3e-23 seq251567 122 1e-21 >seq1891445 Length=18558 Score = 127 bits (140), Expect = 3e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||| | || || || |||||| |||| | | | ||||| || | || Sbjct 7150 ATCTACAAAGTGTTGAAACAAGTACACCCCGACACCG--GCGTC-TCCTCAAA---GGCC 7203 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||| || | Sbjct 7204 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAGCGCATCGCCGCCGAATCCAGC 7263 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||| | || ||||||||| ||| ||| || || || |||||||||||||| Sbjct 7264 CGTTTGGCCCACTACAACAAGCGTTCCACCATCACCAGCCGGGAAATCCAGACCGCCGTC 7323 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | ||| ||| ||| |||||| |||||||||| ||| ||||||| Sbjct 7324 CGTCTCCTGTTGCCCGGTGAATTGGCCAAGCACGCCGTCAGCGAAGGCACCA 7375 >seq251567 Length=509 Score = 122 bits (134), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||| | || || |||||||| |||| || ||||| || | || Sbjct 266 ATCTACAAAGTGTTGAAACAAGTGCACCCTGACACCGGTGTC---TCCTCGAA---GGCC 319 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||| || | Sbjct 320 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAATCCAGC 379 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || |||| | || ||||||||| ||| ||| || || || |||||||||||||| Sbjct 380 CGTTTGGCCCACTACAACAAGCGTTCCACCATCACCAGTCGGGAAATCCAGACCGCCGTC 439 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | ||| ||| ||| |||||| |||||| ||| ||| ||||||| Sbjct 440 CGTCTCTTGTTGCCCGGAGAATTGGCCAAGCACGCTGTCAGCGAAGGCACCA 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6885241717854164