Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq2065080 145 8e-30 >seq2065080 Length=53610 Score = 145 bits (160), Expect = 8e-30 Identities = 284/410 (69%), Gaps = 16/410 (4%) Strand=Plus/Plus Query 143159 TCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAGGAGATTCTCGACTTCAAGATG 143218 ||| || || |||| ||| | || || || | || | | |||||| ||||| | ||| Sbjct 24435 TCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATG 24494 Query 143219 CCAAATTGGATAGTACAATGTTGCGGCACCACCACGAACTCCGCCTTGGGAACAGGATTT 143278 |||||| ||||| ||| || || ||||| || | |||||| ||||| || |||||||| Sbjct 24495 CCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTT 24554 Query 143279 AACTGCAGTTTGGAAGTGTTTCCAGAAAGGAATAACTCCAGTATGCTTGACTTCACCGTT 143338 ||| |||||||| || ||||| ||||||| ||| |||||||| |||| || Sbjct 24555 AACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCC--- 24611 Query 143339 TCCGATTTTTGAA---CCTTCTGCACGCAACATCCCCGCGTTAATGCCAATACCTGCACG 143395 ||| | | | | || | ||||| | ||| | ||||| ||||| |||| | Sbjct 24612 TCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTAATTCCAATTCCTG--CT 24669 Query 143396 CTTACTGATATAC-TCAATAATGCTTGCACTGGCT-TTG--TTAATTGACT-TAAGTGAG 143450 ||| ||| |||| | | | ||| ||| ||| ||| ||||| || | ||| | | Sbjct 24670 CTT--TGAGATACATATTTTACTATTGAACTAGCTGTTGCATTAATAGAATCTAAATTA- 24726 Query 143451 TCACCAGCTTCAATAACAACACAAGAGCTAAACTGACGAGTCGGTGTACGAGCCCCGGCC 143510 ||| || |||||| | ||||||||||||||| || | ||| || || | | || ||| Sbjct 24727 TCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCC 24786 Query 143511 ATAATTGGAGTAGGCAAAGAAATTTGACGAGTAGATACGGCGTCATAAAA 143560 ||||| || || || | ||| ||| | |||||| | ||||||||||| Sbjct 24787 ATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524300089203120