Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq2065080 172 5e-38 >seq2065080 Length=53610 Score = 172 bits (190), Expect = 5e-38 Identities = 305/440 (69%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 14843 ATTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTT 14902 ||| ||||| | | ||||||||| ||| | | || || || |||| ||| | || || Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 14903 CTTTAATACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGC 14962 ||||| || || | || || || || | |||||| || |||||| | |||||||| || Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 14963 ACCACCACGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAA 15022 ||| || | || || |||||||| || ||||| || ||||| ||||||||||| |||| Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 15023 AGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAAT 15082 ||| || |||||||| | |||| || | ||| || |||| ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641 Query 15083 CATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTT--A 15140 || | || || || || || ||| ||| ||| |||| | || |||| || | Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCT--CTT--TGAGATACAT-ATTTTACTATTGAA 24696 Query 15141 CT---TGCTGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTA 15197 || || |||||||||||||| | ||| || |||||| | |||||||| ||| Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756 Query 15198 AACTGACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGA 15257 || || | ||||||||| | | ||||||||||||||||| || | || || | Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAA 24816 Query 15258 GTAGATACAGCGTCATAAAA 15277 ||||| | |||||||||||| Sbjct 24817 GTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 486611046320080