Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq2065080 187 3e-42 >seq2065080 Length=53610 Score = 187 bits (206), Expect = 3e-42 Identities = 309/445 (69%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 139556 TAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 139615 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 139616 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCG 139675 || || ||||| |||||||||||||||||| | ||||||||| || || | || ||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 139676 CCCTGTGAACACGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 139735 || || || || |||||||||||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 139736 TGACGCACTTCACCTGTGCCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 139792 ||| |||| ||| || | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCCT---CCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 139793 ATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCCTTATTGATA 139852 || |||||||| || | || || | ||||| || |||||| || | ||| ||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGCATTAATA 24714 Query 139853 GACTTCAGCGAATCACCTGCCTCAATAACAACACATGAACTAAACTGCCGAGTTGGAGTA 139912 || | | |||| | ||||| | |||||| || ||||| |||| ||| ||||| Sbjct 24715 GAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGAGTT 24774 Query 139913 CGACAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCGAGTAGATACTGCTTCATAA 139972 | ||| |||||||| || ||||| | || || |||||| | || |||||| Sbjct 24775 CTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCATAA 24834 Query 139973 AAACGAATAACATGTTTTAATCTAT 139997 || ||| || | |||||||| Sbjct 24835 AATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513943453011440