Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027353.1 Length=167063 Score E Sequences producing significant alignments: (Bits) Value seq2065080 196 5e-45 >seq2065080 Length=53610 Score = 196 bits (216), Expect = 5e-45 Identities = 300/425 (71%), Gaps = 12/425 (3%) Strand=Plus/Plus Query 140662 TAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 140721 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 140722 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 140781 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 140782 CCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 140841 || || ||||| |||||||||||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 140842 TGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 140898 || | |||| || || | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 140899 ATACCAATTCCAGCACGTTTGGAGATATATTCAACAATTGA---AGCGGAAGCCTTATTG 140955 || |||||||| || | || || | ||||| || ||||| ||| | || ||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGC---ATTA 24711 Query 140956 ATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTGTCGAGTCGGA 141015 ||||| | ||| |||| | ||||| | |||||| || ||||| || | ||| ||| Sbjct 24712 ATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGA 24771 Query 141016 GTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTAGATACTGCTTCA 141075 || | ||| |||||||| || ||||||| || || |||||| | || ||| Sbjct 24772 GTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCA 24831 Query 141076 TAAAA 141080 ||||| Sbjct 24832 TAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514208218383760