Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq2065080 217 3e-51 >seq2065080 Length=53610 Score = 217 bits (240), Expect = 3e-51 Identities = 1050/1631 (64%), Gaps = 69/1631 (4%) Strand=Plus/Minus Query 128389 TATGTTAAGAAGTTCTATGATGCTATTAGTACTTTTGATATTAGTTTACCAACTCCGATT 128448 ||| |||| || || ||||| |||||| ||||||| || | ||||||| |||||| Sbjct 24848 TATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATT 24789 Query 128449 ATGTCCGGTCTTCGCACTAATACACGTCAGTT---CTCAAGTTGTGTAGTACT-GAATGT 128504 ||| | ||| | | ||| ||| | || || ||| |||||| || | |||||| Sbjct 24788 ATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTC---TTGTGTTTTAATTGAATGT 24732 Query 128505 TGGCGATAGTCTTGATAGTATTGGTTCCAGTAATCATGCAATCCTGCGTTATATTTCACG 128564 | |||| | | ||| |||| | | | | | |||| | ||| | || | Sbjct 24731 -GCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCA 24673 Query 128565 TAAAGCAGGGCTTGGTGTTAATATGGGACGTATTCGTGCAATTGATTCTGCAATTCGTGA 128624 | |||||| |||| ||||| | || | |||||||| | | | | ||| | | Sbjct 24672 AAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGG 24613 Query 128625 TGGCGATGCAGTACATACTGGT-GTAGTACCATTCTTATCTGCATTAGCAAAAA-CTGTC 128682 || || ||| | ||||||||| ||| |||| |||| | |||| |||| |||| Sbjct 24612 AGGGGAAGCATTTCATACTGGTTGTA-TACCTTTCT-ACAAACATTTTCAAACTGCTGTT 24555 Query 128683 AAAAGCTGTTCCCAGGGAGGTGTAAGAGGCGGGGCAGCAACCGTACATTTTCCAATGTGG 128742 ||| ||| || || || || || ||||| || || || || | || ||| || ||| Sbjct 24554 AAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGG 24495 Query 128743 CATTTGGAATTTGAAAATATTGTAGTACTGAAAAATAATAAAGGAACTGAATTTAACCGA 128802 ||||| ||| | || ||| | |||| | |||||||||| ||||| ||| ||| ||| Sbjct 24494 CATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGA 24435 Query 128803 GTAAGACAACTGGACTATTGCT-TCCAAATCAATAAGACATTATATCAACGATTGATTGA 128861 |||||||| | || || ||| | ||||| ||||| |||||||||| || || | Sbjct 24434 GTAAGACATGTAGATTA-CGCTATACAAATTAATAAATTATTATATCAAAGAATGTTATC 24376 Query 128862 TGGAAAAGACATTACATTCTTTAGCCCACATGATGTTCCTGATCTATATGATGCATTTTG 128921 | ||||| | |||| || ||||| || |||||||||| ||||||| |||| Sbjct 24375 TAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTTTTT 24316 Query 128922 TGCTGATCAAGAAGAATTTGAACGTCTGTATATTAAGTATGAACTCGATGAAACTATTCG 128981 | |||| ||| | |||||||| || ||| | || |||||| ||| ||| ||| Sbjct 24315 TTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAATTAA 24256 Query 128982 TAGGA---AAACTATG-CCAGCGATTGAAGCATTTAGTCATCTAATACAAGAGCGTGCAG 129037 | | ||| || | ||| |||| | ||| | || | || |||||| | | Sbjct 24255 AAAAAAAGAAATTAAGTCCATAGATTTA---TTTTCTTTAT-TGATGCAAGAGAGAACTT 24200 Query 129038 AAACTGGCCGCATTTATATTCAGAATATTGATAATGCCAATGAGCATGGTTCATTTATTC 129097 || || | || ||||| || ||| | ||| || ||| ||| |||| ||| || Sbjct 24199 CTACAGGAAGAATCTATATACAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATC 24140 Query 129098 CAGAAATTGCACCAATTGAGCAAAGTAATTTGTGTCAGGAAATTGATTTACCATCTGTTC 129157 || |||| || || || ||| |||||| |||| |||||| |||||| || | Sbjct 24139 CAAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAAC 24080 Query 129158 CAT--TTGAAGATATTA-ATAATGGTGAAGGTCTTATTAGC-CTATGTACTTTGAGTGCT 129213 ||| | || || ||| |||| || || | |||| |||||||| | |||| Sbjct 24079 CATTATCTAATATTTTAGATAAAAATGGAG----AAATAGCATTATGTACTCTATCTGCT 24024 Query 129214 ATTAACTGGGGTAATTTTGACAAACCCGAAGATATGGAAGAAGCGTGTGATTTGGCTGTC 129273 | || | || || | | || |||| | || ||| | | |||| ||| Sbjct 24023 TTAAATTTAGGAAAAATAAAAAATATTAAAGAATTAGATGAATTATCTAATTTAATTGTA 23964 Query 129274 CGTGCCCTGGATGCTATTCTTGATTATCAGGATTATCCAGTACTACATGCTGAA---CGA 129330 |||||||| |||||| | | |||||||| || ||||| || || |||| || || Sbjct 23963 CGTGCCCTTGATGCTTTGTTAGATTATCAAGAATATCCTATAATAAGTGCTAAAATTGGA 23904 Query 129331 GC--TACAAAGCTCTACAGACCACTTGGTGTTGGTATTATGAGCCTAGCCTATTTCCTGG 129388 || || ||| ||| | | || || || ||| || | | || |||| || | Sbjct 23903 GCAATAGGAAG-----AAGAGCTATCGGAGTAGGAGTTACGAACTTTGCTTATTATCTTG 23849 Query 129389 CTAAACGTGGCTTAAAATA---CGATACAAACGCATTGAGCACTATTAAC----GAATGG 129441 | ||| | | ||||| ||| || || | | | |||||| || Sbjct 23848 CAAAAAATAATGTTAAATATTCTGATGGAAGTGC--TAATAA--ATTAACACATCAAACA 23793 Query 129442 TCAGAAGCGTGGTCTTATTATTTGATTAAA-GCATCCGTAAACCTTGCAAAAGAAAAAGG 129500 | ||||| |||||||| |||||| ||||| || || |||||||||||||| Sbjct 23792 TTTGAAGCTATACAATATTATTT-ATTAAACGCATCTTGTAATCTAGCAAAAGAAAAAGG 23734 Query 129501 GCATTGTGATGGATTTAAGAATACTAAGTACTCACTGGGTTTATTCCCACATGACACTTA 129560 |||| | || ||| | || ||||| || | |||||| | ||| ||| ||||| Sbjct 23733 AACTTGTTCTTTATATAATCAAACAAAGTATTCGTTAGGTTTACTACCAATTGATACTTA 23674 Query 129561 TAAA--TCAGATTCATAT-ATCAATGAAATTGCACCATATGAATTAAAACAAGATTGGGA 129617 |||| | | ||| |||| || ||| | | ||||| || ||| |||| ||||| Sbjct 23673 TAAAAGTGAAATTGATATCAT--ATGCGA-CGAACCAT-TGCATTTAAAC-----TGGGA 23623 Query 129618 TTCCCTACGTGAAGAAATGATGGTGTATGGTATTCGTAATGCTACATTACATGCAAATAT 129677 | || | || |||| |||||| | | || ||||| || ||| | ||| Sbjct 23622 ATTTTTAAGAAAAAAAATATCAAAATATGGTTTAAGAAACTCTACACTATCTGCTATTAT 23563 Query 129678 GCCAGGAGAAACATCATCACAAATCAGTAATAGTACTGCTGGTATTGAAAAGATTCGTTC 129737 ||| ||||||||| || ||||| ||| ||| ||| || || | | Sbjct 23562 GCCTTCAGAAACATCTTCTCAAATATCAAATGCAACTAATGGAATAGAGCCTCCTAGAGG 23503 Query 129738 TCTTGTAACAGTAAAAACTTCTAAAGATGGTGTTCTTAAACAAGTTGTACCTGAAATTTC 129797 || | | ||||| | |||||||||||| | |||||||||||||| || ||| | Sbjct 23502 ATTTATTAGTATAAAAGCATCTAAAGATGGTATGCTTAAACAAGTTGTTCCCGAATATAA 23443 Query 129798 AAAATTAAAGAACAAA-TATGACCTACTATGGGAACAATCTGATAATATTGGTTATCTTC 129856 |||| |||| | |||| ||||| || ||||||| | | |||||||| || |||||| Sbjct 23442 AAAACTAAA-ATCAAAGTATGAATTATTATGGGATATACCGGATAATATCGGATATCTTA 23384 Query 129857 AGGTGTGCGGCGTTATGCAGAAATACATGGATCAAGGTATAAGTACTAATACGAGTTATA 129916 | | || ||||||| |||| | |||||| || ||||||||| | |||| Sbjct 23383 AATTAGTTGGTATTATGCAAAAATTTGTTGATCAATCAATTTCTACTAATACTAATTATG 23324 Query 129917 ATCC-TGAAAAGTTCCAAGATGGAAAAGTGCCAATGTCAGTACTGTTAACAGAACTTCTA 129975 |||| | |||| |||| |||||||||| | || ||| | || | ||| ||| | || Sbjct 23323 ATCCATCAAAATTTCC-AGATGGAAAAATTCCGATGAAATTATTACTAAAAGATTTATTA 23265 Query 129976 ATGGCTTATAA 129986 | |||||||| Sbjct 23264 ACTGCTTATAA 23254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1065894724668678