Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027404.1 Length=167785 Score E Sequences producing significant alignments: (Bits) Value seq2065080 188 7e-43 >seq2065080 Length=53610 Score = 188 bits (208), Expect = 7e-43 Identities = 278/391 (71%), Gaps = 12/391 (3%) Strand=Plus/Plus Query 138894 TAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 138953 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 138954 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 139013 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 139014 CCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 139073 || || ||||| |||||||||||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 139074 TGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 139130 || | |||| || || | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 139131 ATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA---AGCGGAAGCCTTATTG 139187 || |||||||| || | || ||| | ||||| || ||||| ||| | || ||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGC---ATTA 24711 Query 139188 ATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACTAAACTGTCGAGTCGGA 139247 ||||| | || ||| | ||||| | |||||| || ||||| || | ||| ||| Sbjct 24712 ATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGA 24771 Query 139248 GTACGACAACCAGCCATAATAGGAGTTGGTA 139278 || | ||| |||||||| || ||||||| Sbjct 24772 GTTCTTACACCTGCCATAATCGGTGTTGGTA 24802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516431016044400