Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_027983.1 Length=167435 Score E Sequences producing significant alignments: (Bits) Value seq2065080 190 2e-43 >seq2065080 Length=53610 Score = 190 bits (210), Expect = 2e-43 Identities = 322/464 (69%), Gaps = 12/464 (3%) Strand=Plus/Plus Query 139898 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 139957 ||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 139958 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 140017 ||| ||||| | | ||| || ||||| |||||||||||||||||| | ||||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 140018 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAA 140077 || || | || |||||| || || || |||||||| ||||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 140078 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACG 140134 ||| ||| ||||||||| | |||| || || | ||| || | || ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACG 24638 Query 140135 AATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCTACAATCGA--- 140191 ||| || || ||||| |||||||| || | || ||| | ||||| ||| || || Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698 Query 140192 AGCGGAAGCCTTATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAACT 140251 ||| | || ||| ||||| | ||| |||| | ||||| | |||||| || || Sbjct 24699 AGCTGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCT 24755 Query 140252 AAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCG 140311 ||| || | ||| ||||| | ||| |||||||| || ||||| | || || Sbjct 24756 AAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAA 24815 Query 140312 AGTAGATACTGCTTCATAAAAACGGATAACATGTTTTAATCTAT 140355 |||||| | || |||||||| ||| || | |||||||| Sbjct 24816 AGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515353482552400