Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2049698 118 1e-21
seq1869705 105 8e-18
seq2002493 93.3 5e-14
seq2074987 86.0 8e-12
seq1994730 86.0 8e-12
seq1886602 86.0 8e-12
seq1429029 84.2 3e-11
>seq2049698
Length=133754
Score = 118 bits (130), Expect = 1e-21
Identities = 293/442 (66%), Gaps = 2/442 (0%)
Strand=Plus/Plus
Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511
||||||||| || ||||| | | || ||||||| ||||| | | || || || ||
Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237
Query 11512 AATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAAT 11571
||| || | || ||||| | ||||| |||||||| || || || | ||||| |
Sbjct 11238 AATCACAATGATACCAGTGTTCCCTTCAAAACCATCCATTTCTGTAAGAAGCTGATTCAG 11297
Query 11572 TGTTTGTTCTCTCTCATCATTTGCTGG-CATACCACCAGCACTGCGTTGCTTGCCCACCG 11630
|||||||||| |||||||||| || | || |||| | | ||| | || || |
Sbjct 11298 GGTTTGTTCTCGCTCATCATTTCCTCCACCTATT-CCAGTTCCTCTCTGCCTACCAACTG 11356
Query 11631 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 11690
||||||| ||||| | ||| ||||| || || |||||| ||| ||| || || |
Sbjct 11357 CATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGGT 11416
Query 11691 CGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACT 11750
| || || || || || | ||| ||||||||||| ||||| | | | |||
Sbjct 11417 CACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTGAGATAG 11476
Query 11751 GGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTAC 11810
|| ||| || ||| | ||| || || ||||| ||| || | ||||| || || |
Sbjct 11477 AGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAGTCC 11536
Query 11811 CTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCT 11870
|||| |||| | ||||| | ||| || || || ||| || || | | ||||
Sbjct 11537 CTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAACCTCT 11596
Query 11871 CGGGTTGCTTGAGAAAATCCAC 11892
| |||| ||| || || || ||
Sbjct 11597 CTGGTTTCTTCAGGAACTCAAC 11618
>seq1869705
Length=65823
Score = 105 bits (116), Expect = 8e-18
Identities = 189/275 (69%), Gaps = 6/275 (2%)
Strand=Plus/Plus
Query 11462 CCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACA 11521
|| || ||||| | || |||| || | ||| || ||||| || || || || || |
Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164
Query 11522 ATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCT 11581
| ||||| | ||||| ||||||||||| || || ||||| || | ||| ||||||
Sbjct 20165 ACTCCAGTGTTCCCTTCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTCT 20224
Query 11582 CTCTCATCATTTGCTGGCATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATC 11638
| |||||||| || |||| || || | | ||| | ||||| ||||| |
Sbjct 20225 CGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAGT 20281
Query 11639 TCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACC 11698
||||| ||||| | |||||| ||| |||||| || | | || ||||| ||||||
Sbjct 20282 TCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAAAGATCACGAACC 20341
Query 11699 CTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733
|| ||| || || || ||||||||||| | |||
Sbjct 20342 CTAGAGGCTCCTACTCCTACAAACATCTCTATAAA 20376
>seq2002493
Length=19711
Score = 93.3 bits (102), Expect = 5e-14
Identities = 246/368 (67%), Gaps = 17/368 (5%)
Strand=Plus/Plus
Query 9205 CACCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGT 9262
|||| || |||||| | || |||||| ||||| | ||| || | ||||| ||| |
Sbjct 12363 CACCCCAGAACGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCT 12420
Query 9263 TGCGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTC 9319
||| || |||||| || ||||| ||| | ||| | || ||| ||||||| |||
Sbjct 12421 TGCAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAA 12477
Query 9320 CGGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGAT 9379
|| |||||||||||||| || || || || |||||| ||||||| || | ||||||
Sbjct 12478 TGGGATCCTCTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGAT 12537
Query 9380 TACCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAA 9436
||| || | | ||||| | || | | ||| || | | ||||| ||
Sbjct 12538 CACCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAA 12594
Query 9437 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCAT 9496
| || || || |||||||| || ||||||||| || || |||||| | ||
Sbjct 12595 TCTCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGAT 12654
Query 9497 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAG-TGA 9555
| | || ||||| | |||| || ||||| || || || | ||| | |||| | | |||
Sbjct 12655 GGTGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGA 12714
Query 9556 GGCGGTTC 9563
|| | |||
Sbjct 12715 GGAGTTTC 12722
>seq2074987
Length=98398
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 145287 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 145346
||| |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||| |||
Sbjct 15417 TATGGTGTAGTGGTTATCACTTTGTACTTTGAATCCAACGACCTTGGTTCAAGTCCCGGT 15358
Query 145347 AGGAGCT 145353
|||| ||
Sbjct 15357 AGGACCT 15351
>seq1994730
Length=131235
Score = 86.0 bits (94), Expect = 8e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 111014 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072
|| ||||| ||||||| | || | |||||||||| ||| || || || ||||||||
Sbjct 120006 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 120064
Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 111132
| |||||||||||||| |||||||| |||| ||||| || || ||||| ||||
Sbjct 120065 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 120124
Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||||||| | ||| || |||| ||||| || |||||
Sbjct 120125 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 120168
>seq1886602
Length=15129
Score = 86.0 bits (94), Expect = 8e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 111014 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072
|| ||||| ||||||| | || | |||||||||| ||| || || || ||||||||
Sbjct 12395 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 12453
Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 111132
| |||||||||||||| |||||||| |||| ||||| || || ||||| ||||
Sbjct 12454 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 12513
Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||||||| | ||| || |||| ||||| || |||||
Sbjct 12514 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 12557
>seq1429029
Length=1223
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 145287 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 145346
||| |||||||||| |||||| ||||||||||||||||| | | ||||| ||||| |||
Sbjct 1068 TATGGTGTAGTGGTTATCACTCTGGACTTTGAATCCAACGAACTAGGTTCGAATCCCGGT 1009
Query 145347 AGGAGCTTTACCCA 145360
|||| ||||| |||
Sbjct 1008 AGGAACTTTAGCCA 995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 604219208971200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |