Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2049698 118 1e-21 seq1869705 105 8e-18 seq2002493 93.3 5e-14 seq2074987 86.0 8e-12 seq1994730 86.0 8e-12 seq1886602 86.0 8e-12 seq1429029 84.2 3e-11 >seq2049698 Length=133754 Score = 118 bits (130), Expect = 1e-21 Identities = 293/442 (66%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511 ||||||||| || ||||| | | || ||||||| ||||| | | || || || || Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237 Query 11512 AATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAAT 11571 ||| || | || ||||| | ||||| |||||||| || || || | ||||| | Sbjct 11238 AATCACAATGATACCAGTGTTCCCTTCAAAACCATCCATTTCTGTAAGAAGCTGATTCAG 11297 Query 11572 TGTTTGTTCTCTCTCATCATTTGCTGG-CATACCACCAGCACTGCGTTGCTTGCCCACCG 11630 |||||||||| |||||||||| || | || |||| | | ||| | || || | Sbjct 11298 GGTTTGTTCTCGCTCATCATTTCCTCCACCTATT-CCAGTTCCTCTCTGCCTACCAACTG 11356 Query 11631 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 11690 ||||||| ||||| | ||| ||||| || || |||||| ||| ||| || || | Sbjct 11357 CATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGGT 11416 Query 11691 CGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACT 11750 | || || || || || | ||| ||||||||||| ||||| | | | ||| Sbjct 11417 CACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTGAGATAG 11476 Query 11751 GGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTAC 11810 || ||| || ||| | ||| || || ||||| ||| || | ||||| || || | Sbjct 11477 AGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAGTCC 11536 Query 11811 CTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCT 11870 |||| |||| | ||||| | ||| || || || ||| || || | | |||| Sbjct 11537 CTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAACCTCT 11596 Query 11871 CGGGTTGCTTGAGAAAATCCAC 11892 | |||| ||| || || || || Sbjct 11597 CTGGTTTCTTCAGGAACTCAAC 11618 >seq1869705 Length=65823 Score = 105 bits (116), Expect = 8e-18 Identities = 189/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 11462 CCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACA 11521 || || ||||| | || |||| || | ||| || ||||| || || || || || | Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164 Query 11522 ATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCT 11581 | ||||| | ||||| ||||||||||| || || ||||| || | ||| |||||| Sbjct 20165 ACTCCAGTGTTCCCTTCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTCT 20224 Query 11582 CTCTCATCATTTGCTGGCATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATC 11638 | |||||||| || |||| || || | | ||| | ||||| ||||| | Sbjct 20225 CGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAGT 20281 Query 11639 TCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACC 11698 ||||| ||||| | |||||| ||| |||||| || | | || ||||| |||||| Sbjct 20282 TCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAAAGATCACGAACC 20341 Query 11699 CTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 || ||| || || || ||||||||||| | ||| Sbjct 20342 CTAGAGGCTCCTACTCCTACAAACATCTCTATAAA 20376 >seq2002493 Length=19711 Score = 93.3 bits (102), Expect = 5e-14 Identities = 246/368 (67%), Gaps = 17/368 (5%) Strand=Plus/Plus Query 9205 CACCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGT 9262 |||| || |||||| | || |||||| ||||| | ||| || | ||||| ||| | Sbjct 12363 CACCCCAGAACGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCT 12420 Query 9263 TGCGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTC 9319 ||| || |||||| || ||||| ||| | ||| | || ||| ||||||| ||| Sbjct 12421 TGCAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAA 12477 Query 9320 CGGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGAT 9379 || |||||||||||||| || || || || |||||| ||||||| || | |||||| Sbjct 12478 TGGGATCCTCTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGAT 12537 Query 9380 TACCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAA 9436 ||| || | | ||||| | || | | ||| || | | ||||| || Sbjct 12538 CACCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAA 12594 Query 9437 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCAT 9496 | || || || |||||||| || ||||||||| || || |||||| | || Sbjct 12595 TCTCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGAT 12654 Query 9497 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAG-TGA 9555 | | || ||||| | |||| || ||||| || || || | ||| | |||| | | ||| Sbjct 12655 GGTGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGA 12714 Query 9556 GGCGGTTC 9563 || | ||| Sbjct 12715 GGAGTTTC 12722 >seq2074987 Length=98398 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 145287 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 145346 ||| |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||| ||| Sbjct 15417 TATGGTGTAGTGGTTATCACTTTGTACTTTGAATCCAACGACCTTGGTTCAAGTCCCGGT 15358 Query 145347 AGGAGCT 145353 |||| || Sbjct 15357 AGGACCT 15351 >seq1994730 Length=131235 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 111014 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 || ||||| ||||||| | || | |||||||||| ||| || || || |||||||| Sbjct 120006 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 120064 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 111132 | |||||||||||||| |||||||| |||| ||||| || || ||||| |||| Sbjct 120065 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 120124 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||||||| | ||| || |||| ||||| || ||||| Sbjct 120125 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 120168 >seq1886602 Length=15129 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 111014 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 || ||||| ||||||| | || | |||||||||| ||| || || || |||||||| Sbjct 12395 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 12453 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 111132 | |||||||||||||| |||||||| |||| ||||| || || ||||| |||| Sbjct 12454 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 12513 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||||||| | ||| || |||| ||||| || ||||| Sbjct 12514 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 12557 >seq1429029 Length=1223 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 145287 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 145346 ||| |||||||||| |||||| ||||||||||||||||| | | ||||| ||||| ||| Sbjct 1068 TATGGTGTAGTGGTTATCACTCTGGACTTTGAATCCAACGAACTAGGTTCGAATCCCGGT 1009 Query 145347 AGGAGCTTTACCCA 145360 |||| ||||| ||| Sbjct 1008 AGGAACTTTAGCCA 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604219208971200