Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2049698 125 8e-24 seq1869705 84.2 3e-11 >seq2049698 Length=133754 Score = 125 bits (138), Expect = 8e-24 Identities = 251/368 (68%), Gaps = 8/368 (2%) Strand=Plus/Plus Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124 |||||| || |||||||| | | || | ||||| |||||| | ||| || || || Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237 Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 || |||| ||| || || | ||||| |||||||| || || | || ||||| | Sbjct 11238 AATCACAATGATACCAGTGTTCCCTTCAAAACCATCCATTTCTGTAAGAAGCTGATTCAG 11297 Query 14185 GGTTTGTTCGCGTTCATCATTCGC---AGGCATACCACCCGCACTGCGTTGCTTACCGAC 14241 ||||||||| || |||||||| | | || ||| | || ||| |||| || Sbjct 11298 GGTTTGTTCTCGCTCATCATTTCCTCCACCTATTCCAGTTCCTCTC---TGCCTACCAAC 11354 Query 14242 GGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGAT 14301 || ||||||||||||| |||||| || || || |||||| ||| || || | Sbjct 11355 TGCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAG 11414 Query 14302 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACA 14361 || |||||||| || |||| ||| ||||||||||| ||||| | | | | | | Sbjct 11415 GTCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AGA 11473 Query 14362 TTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420 | | || |||||| || || ||| || || ||||| ||| || | |||||||| | Sbjct 11474 TAGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAG 11533 Query 14421 TCCCTGGT 14428 |||||||| Sbjct 11534 TCCCTGGT 11541 >seq1869705 Length=65823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 209/309 (68%), Gaps = 10/309 (3%) Strand=Plus/Plus Query 14096 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAG 14155 || || | ||||| || || || || |||||||||| | || || | ||||| Sbjct 20126 TCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATCACTCCAGTGTTCCCTTCAAAT 20185 Query 14156 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATA 14215 |||||||||||||| | | ||| || | || ||||| ||||||||||| || | | Sbjct 20186 CCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTCTCGTTCATCATT-GCCTCC--A 20242 Query 14216 CCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAT 14272 ||| || || | | ||| | || || || || | |||||| ||||||| ||||| Sbjct 20243 CCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAGTTCATCTATGAAAATAATACAA 20302 Query 14273 GGTTGATTTT-CACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCAC 14331 ||| ||||| | | | ||| ||| | ||| || || || ||| || || || || Sbjct 20303 GGTGCATTTTCCTTTGCCCTCTTGAAA-AGATCACGAACCCTAGAGGCTCCTACTCCTAC 20361 Query 14332 AAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCG 14390 ||||||||| | ||| | | | ||| || | | ||||||||| | |||||| | Sbjct 20362 AAACATCTCTATAAATTCAGACCCAGAA-ATAGAAAAGAAGGGGACCCCCGCTTCACCAG 20420 Query 14391 CGATGGCTC 14399 |||| |||| Sbjct 20421 CGATTGCTC 20429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594986286278320