Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq2049698 125 8e-24
seq2002493 107 2e-18
seq1869705 102 9e-17
>seq2049698
Length=133754
Score = 125 bits (138), Expect = 8e-24
Identities = 305/452 (67%), Gaps = 10/452 (2%)
Strand=Plus/Plus
Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585
|||||| || ||||| || | | || ||||||| |||||| | | || || || ||
Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237
Query 9586 GATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9644
|| |||| ||||| || ||| | |||||||||||||| ||||| | ||| || || |
Sbjct 11238 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 11296
Query 9645 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 9703
|||||||| || |||||||| || | || |||| | | ||| | || ||
Sbjct 11297 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 11355
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763
|||||||| ||||| | ||| || ||||| || |||||| || || || ||
Sbjct 11356 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 11415
Query 9764 TCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 9821
|| || ||| || | || || | ||| ||||||||||| ||||| | | | | |
Sbjct 11416 TCACG--CACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AG 11472
Query 9822 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 9880
|| | || |||||| ||| || ||| || |||||||| ||| || | |||||| ||
Sbjct 11473 ATAGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCA 11532
Query 9881 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTAT 9940
|| ||||| |||| | || || | ||| ||||| || ||| || || |
Sbjct 11533 GTCCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAAC 11592
Query 9941 CTCTCAGGTTGCTTAAGAAAATCCACAATTTC 9972
||||| |||| ||| || || || || | |||
Sbjct 11593 CTCTCTGGTTTCTTCAGGAACTCAACCACTTC 11624
>seq2002493
Length=19711
Score = 107 bits (118), Expect = 2e-18
Identities = 248/366 (68%), Gaps = 17/366 (5%)
Strand=Plus/Plus
Query 7283 CCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGTTG 7340
|| || |||||| | || |||||| ||||| | ||| || | ||||| ||| |||
Sbjct 12365 CCCCAGAACGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCTTG 12422
Query 7341 CGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCG 7397
| || |||||| || ||||| ||| | ||| | || ||| ||||||| ||| |
Sbjct 12423 CAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAATG 12479
Query 7398 GAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTA 7457
| |||||||||||||| || || || || |||||| |||||||||||| |||||| |
Sbjct 12480 GGATCCTCTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGATCA 12539
Query 7458 CCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAACA 7514
|| || | | ||||| | || | | ||| || | | ||||| ||
Sbjct 12540 CCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAATC 12596
Query 7515 TAAACGCGGCGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGC 7574
| || || | || |||||||| || ||||||||| || || |||||| | |||
Sbjct 12597 TCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGATGG 12656
Query 7575 TTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATACAG-TGAGG 7633
| || ||||| | |||| || ||||| || || || | ||| | |||||| | |||||
Sbjct 12657 TGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGAGG 12716
Query 7634 CGGTTC 7639
| |||
Sbjct 12717 AGTTTC 12722
>seq1869705
Length=65823
Score = 102 bits (112), Expect = 9e-17
Identities = 322/485 (66%), Gaps = 18/485 (4%)
Strand=Plus/Plus
Query 9536 CCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACA 9595
|| || ||||| | || |||| || | |||||| ||||| || || ||||||||||
Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164
Query 9596 ATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTC 9654
| || || ||| | ||||| ||||||||||| || | | |||||| | || |||||
Sbjct 20165 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 20223
Query 9655 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 9711
||||||||||| || |||| || || | | ||| ||||||| ||||| |
Sbjct 20224 TCGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAG 20280
Query 9712 CTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTA 9770
||||| ||||| | || || ||| |||||| | | ||| ||| ||||| || |
Sbjct 20281 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAA-AGATCACGAA 20339
Query 9771 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATG 9829
| | ||| || || || ||||||||||| | ||| | | | ||| || | | |
Sbjct 20340 CCCTAGAGGCTCCTACTCCTACAAACATCTCTATAAATTCAGACCCAGAA-ATAGAAAAG 20398
Query 9830 AAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9889
|||||||| | |||||| || || |||| || | | || || || || || ||
Sbjct 20399 AAGGGGACCCCCGCTTCACCAGCGATTGCTCTTGCCAACAATGTTTTTCCAGTTCCAGGA 20458
Query 9890 TTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG---CCACTTCCAAAGTATCTCTCA 9946
||| | | | | | || | ||| | || ||| |||| | || | || ||||
Sbjct 20459 GGACCTACCAACAAGAC-CCCCTTGGGA-ATTCGCGCTCCCAC-TGCAGTGAATTTCTCT 20515
Query 9947 GGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCA 10006
|||| ||| | ||| ||||| ||||| | || || | |||||| | || | || ||
Sbjct 20516 GGTTTCTTCAAAAATTCCACTATTTCCTTGAAATCTTGTTTGGCTTCTTCTACACCAGCA 20575
Query 10007 ACATC 10011
|||||
Sbjct 20576 ACATC 20580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561145577295280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |