Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq2065080 138 1e-27 >seq2065080 Length=53610 Score = 138 bits (152), Expect = 1e-27 Identities = 278/411 (68%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842 |||||| || | | ||||||| || | | || || || |||| ||| |||| || Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902 ||| | ||| | | || || ||||||||||||||||| ||||| ||| || || || Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGTTTTCCAGAA 147962 ||| || | || |||||||| || || |||||||||| || ||||| | ||| |||| Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 147963 TGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCTGCACGAAT 148022 || || || || || |||| || || ||| | || | |||||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641 Query 148023 CATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAGCATT 148082 || | |||| ||||| || |||| || | | || || | |||||| | Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGC 24701 Query 148083 TGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAG---AA 148139 ||| | |||||| ||||| | |||| ||| |||||| | ||||||| ||| || Sbjct 24702 TGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAA---GAGCTAAA 24758 Query 148140 TTGACGAGTCGGAGTACGAACACCTGCCATAATTGGAGTTGGCAGTGAAAT 148190 ||| | ||| ||||| | |||||||||||||| || ||||| || || || Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATAT 24809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546780516513360