Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq2065080 244 1e-59 >seq2065080 Length=53610 Score = 244 bits (270), Expect = 1e-59 Identities = 988/1537 (64%), Gaps = 67/1537 (4%) Strand=Plus/Plus Query 136569 GGAACAACTTGATTAAACGACCCGTCTTTAGAAGCTTTTGCCGTCACAGATTTTCTTGGT 136628 ||||||||||| |||| | || |||||||| |||||| | | | || ||| || Sbjct 23452 GGAACAACTTGTTTAAGCATACCATCTTTAGATGCTTTTATACTAATAAATCCTCTAGGA 23511 Query 136629 GGCTCAATACCATTTGTGCTATTAGAAACTTGAGAAGATGATTCACAAGGCATTAATGCA 136688 ||||| || ||||| || ||| || | ||||||||||| ||| ||||||| | ||| Sbjct 23512 GGCTCTATTCCATTAGTTGCATTTGATATTTGAGAAGATGTTTCTGAAGGCATAATAGCA 23571 Query 136689 GATAAAGTACTGTTTCTGATACCGTATTGCTTAAGGTCTTTACGTAAAGATTCCCAATCA 136748 |||| ||| |||||| | ||| |||| | | ||| | |||| ||||||| | Sbjct 23572 GATAGTGTAGAGTTTCTTAAACCATATTTTGATATTTTTTTTCTTAAAAATTCCCAGTTT 23631 Query 136749 CAAACATATTCTGGTTTAAC---TACTTTATCAAGGTTTTTATTATACCAATCAATGGGT 136805 || || |||| | || |||||| | | ||||| |||||| ||| Sbjct 23632 AAATGCAAT---GGTTCGTCGCATATGATATCAATTTCACTTTTATAAGTATCAATTGGT 23688 Query 136806 AATAAGCCTTGAGAATATTTAGTTTCATGATAAAGCTCACAAGGTCCTTTTTCTTTTGCT 136865 | ||| ||| ||||| || |||| || ||| | ||||| |||||||||||||||| Sbjct 23689 AGTAAACCTAACGAATACTTTGTTTGATTATATAAAGAACAAGTTCCTTTTTCTTTTGCT 23748 Query 136866 AAATCAACAGAGGCCTTAATTAATCCATACTGTAAACGTTCAAATAACTCATGAGTAAAC 136925 | || | ||| || || | ||| ||| |||| | ||||||| | ||| || || Sbjct 23749 AGATTACAAGATGCGTTTAATAAATAATATTGTATAGCTTCAAATGTTTGATGTGTTAAT 23808 Query 136926 TGTTGAGCATT---ATCATAAT--TTAAAAAC-TGCGAAGCTAAAGAAGCAGCATAATTA 136979 | | |||| | |||| ||| |||| | | || | | || |||| | || Sbjct 23809 TTATTAGCACTTCCATCAGAATATTTAACATTATTTTTTGCAAGATAATAAGCAAAGTTC 23868 Query 136980 GTTACACCAACACCTAATGCACGGCGTTTTTTAGC---AATCAATGCTTTTTCTACAGGA 137036 || || || || || | || | | | | | || ||| || || || |||| Sbjct 23869 GTAACTCCTACTCCGATAGCTCTTCTTCCTATTGCTCCAATTTTAGCACTTATTATAGGA 23928 Query 137037 TAATCTTGATAATCTAATAAAGCATCCAATGCTCTAACAGCCACACGTGCAATTTTATTA 137096 || |||||||||||||| |||||||| | || |||| ||||| |||| Sbjct 23929 TATTCTTGATAATCTAACAAAGCATCAAGGGC------------ACGTACAATTAAATTA 23976 Query 137097 ---ATTTGTTCTTGGTCTTGATAATCAA--ATGAATC--AAGTACAAATGCTGATAGAGT 137149 | || ||| |||| | || || || || | ||| || |||||||| Sbjct 23977 GATAATTCATCTAATTCTTTAATATTTTTTATTTTTCCTAAATTTAAA-GCAGATAGAGT 24035 Query 137150 GCAAAGTGCTATTTCCCCATC---ATCTTTACTAATA--TCAC----TCGTGGGTAATGT 137200 || | ||||||||| |||| |||| | || || | | | || ||||| || Sbjct 24036 ACATAATGCTATTTCTCCATTTTTATCTAAAATATTAGATAATGGTTTAGTAGGTAAAGT 24095 Query 137201 AATCTCTGCGCATAAATTGCTTAATCTAATAGGAGACGTTTCTCTAATAAATGAACTTTG 137260 || || |||||||| | ||| ||||||| ||| | | ||| ||||| || Sbjct 24096 TATTTCCAGACATAAATTAGATTGTCTGATAGGAGCTATTTTTGGATCAAAAGAACTATG 24155 Query 137261 TCTATTAACATTATCAACAAAGAATGGATAAATTCTTGCTGTATTAGCACGCTCTGTTAA 137320 ||||| || ||| ||| | ||| |||||| ||||| || | |||| | Sbjct 24156 AGTATTACAATGATCTACATTTTGTATATAGATTCTTCCTGTAGAAGTTCTCTCTTGCAT 24215 Query 137321 TAAAATAGAAAATACTTCAGATGCCTTGATTCGTTTTTTACGAATAGAAGTATCTTTTTC 137380 || | |||||||| || | ||| ||| |||||| ||| |||||||||| Sbjct 24216 CAATAAAGAAAATAAATCTATGGACTTAATTTCTTTTTTTTTAATTTTTTTATCTTTTTC 24275 Query 137381 TGCGGCTTCGTATAAATCACGGAATTTCTGTTCGTTACTAAAATAAGCATCATACATACC 137440 | | |||| || ||||| || || | |||| || ||||| | Sbjct 24276 ATATTTTACATATAGTTCTTCAAATTTTATTTGGTCAGAAAAAAAACTTTCATATAATAA 24335 Query 137441 AGGGATTTCATGTGGACTAAACAATGTAATATAATCATCATTAATTAGTCGTTCA-ATCA 137499 ||| | ||| |||||||| || |||| | | | | | || || | || | Sbjct 24336 AGGAACATCAGAAGGACTAAATAAACTAATTTTTTTTCTAGATAACATTCTTTGATATAA 24395 Query 137500 TAAGGTCATTAATTTGAACACCATAATCTAAATGACGAATACGGTTTTCTTCAATACCTT 137559 ||| | ||||||||| | | | ||||||| ||| | | || || ||||| || ||| Sbjct 24396 TAATTT-ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTC 24454 Query 137560 TATTATTTTTAAGAACTAACAATTTTTCTAATTCAAGGTGCCACATTGGGTAATATAAAG 137619 |||||||||| | ||||||||| || |||| ||| | ||||| || || ||| | | || Sbjct 24455 TATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAG 24514 Query 137620 TAGCAGAACCACCTCGAATCCCACCTTGGGAACATGATTTTACAGATGCC---AAATGGG 137676 |||||| ||| |||| || |||||||| || || ||||| |||| | ||||| Sbjct 24515 TAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATG-- 24572 Query 137677 TTTTCCAAAATGGAATGACACCGGTATGGACAACTTCGCCAAATCCTATTTTAG-AC--C 137733 ||| | || || || ||| ||||| | |||| || |||| | ||| || | Sbjct 24573 -TTTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCC---TCCTCTAATAGGACTTC 24628 Query 137734 CTTCAGCCCTATACATACCGGCATTAATACCAATACCAGCTCTTTTAGAAATGTATTTTA 137793 | |||| | | || ||||||| ||||| || ||||||| ||| | ||||||| Sbjct 24629 CGACAGCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTA 24688 Query 137794 CAATAGCTGCATTTGTTTCATTAATAGAATCTAAAGAATCACCGCTATCAATAACTACGC 137853 | || | | |||| ||||||||||||||||| |||| | | ||||| | || | Sbjct 24689 CTATTGAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACAC 24748 Query 137854 AAGAACTAAATTGACGTGTTGGGGTTCTTACACCAGACAAAATTGGTGTTGGTAAAGACA 137913 |||| |||||||| | || || ||||||||||| | || ||| |||||||||| ||| | Sbjct 24749 AAGAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATA 24808 Query 137914 ATTGCTTATCTGATACAACTTCATAGAATTCAATTACCTTTTCTAGTCTGTTTTCA---- 137969 | | || | | | ||||| |||| | | | |||| ||| |||| | Sbjct 24809 TTCTAAAAGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTATTTTTATGAG 24868 Query 137970 ACTTCTTCTTGGAATAAACACATTCCAATAAGCATAAACGCATATTGAGGTGTTTCGTAA 138029 | | |||| |||||||| | |||||| ||| | | ||||||| ||||||| Sbjct 24869 AATACTTC-GAAAATAAACATGCTGAAATAAGAATATATAAAAATTGAGGACTTTCGTAT 24927 Query 138030 ATAATTCCTGTTGAACGGTCTTT--AACCATATATTT 138064 || ||||||| ||| | ||| ||| | |||||| Sbjct 24928 ATTTTTCCTGT--AACCCTATTTTGAACTAAATATTT 24962 Score = 131 bits (144), Expect = 2e-25 Identities = 261/380 (69%), Gaps = 15/380 (4%) Strand=Plus/Plus Query 135754 TTACGCATAATATGGGTATACGAACGAGAATGAATTGTTTCACTAAATGACCAGGTCTGA 135813 || || || ||||| ||||| || |||||||| || |||||| ||||||||| || | | Sbjct 22707 TTTCGAATTATATGAGTATAAGATCGAGAATGTATAGTTTCAGAAAATGACCAAGTTTCA 22766 Query 135814 ATCCATGTTTCTAA---AGATACATCAGAACAAATAGATAATAAAGCCTCTGAAGGACCT 135870 |||||||||||||| || || || || || || ||||| |||| | Sbjct 22767 ATCCATGTTTCTAATTCAGGTATT---GATACAACAGGCAAAAAAGCTATATTTGGACTT 22823 Query 135871 CTGCCTTGGATTGAATCTAATAATGTTTGATATTTTAAATTATTAGTAAAGATTCTTTTT 135930 || ||||| |||||||||| ||| |||||||||||||||||| | ||| || |||| Sbjct 22824 CTTCCTTGAATTGAATCTAGTAAGGTTTGATATTTTAAATTACTTAAAAAAATGTGTTTT 22883 Query 135931 TCGTGTTCAGGTAATTTGTCATATTGTGCCTTATCTGTCATTAAGTTTACTTCTTCAGGA 135990 || |||| || || |||| | | | | |||| | ||| | || ||||||||| Sbjct 22884 TCATGTTTTGGCAAATTGTTAAAATCTATTCGATCTTTAGATAAATCTATTTCTTCAGGT 22943 Query 135991 CGCCaaaaaaaGCTTAAAG--CTTTTTCAGTCAAGTCTTCAAAGACCCGATGTTTTACTG 136048 | ||||||||| |||| |||||| | || | |||||| | || |||| || Sbjct 22944 CTCCAAAAAAA--AGAAAGTTGTTTTTCTATTAATTTTTCAAAAATTATATATTTT--TG 22999 Query 136049 TT--TCGTAACGTGCAATACCTGTGGATTCACCAAAAAACATTGGTTGTTCCATAATATT 136106 || || || | | |||| | || |||||||||||||||| || || || | Sbjct 23000 TTGATCATATCTGGAAATATTAACTGGTTGTCCAAAAAACATTGGTTCTTGCA-AAGGAT 23058 Query 136107 GATTTGGTTTTTATTAAAAA 136126 |||| ||||| | ||||| Sbjct 23059 CATTTTTTTTTTTTGAAAAA 23078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498587061416880