Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_028780.1
Length=167124
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 185 9e-42
>seq2065080
Length=53610
Score = 185 bits (204), Expect = 9e-42
Identities = 321/464 (69%), Gaps = 12/464 (3%)
Strand=Plus/Minus
Query 22744 ATAGATTAAAACATGTTATTCGTTTTTATGAAGCAGTATCTACTCGACAGATTTCATTGC 22803
|||||||| | || ||| |||||||| || | |||||| || || | |
Sbjct 24859 ATAGATTAGATTATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTAC 24800
Query 22804 CAACTCCTATTATGGCTGGTTGTCGTACTCCGACTCGACAGTTTAGTTCATGCGTTGTTA 22863
|||| || |||||||| ||| | ||||| ||| | || ||||| || || ||| | |
Sbjct 24799 CAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAA 24740
Query 22864 TTGAGGCAGGTGATTCATTAAAGTCTATCAATAAGGCTTCCGCT---TCAATTGTTGAAT 22920
|||| | |||| ||| | ||||| ||| || | ||| ||||| || |||
Sbjct 24739 TTGAATGTGCTGATAATTTAGATTCTATTAAT---GCAACAGCTAGTTCAATAGTAAAAT 24683
Query 22921 ATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGC---CGAAGGTT 22977
|| | ||| || | || |||||||| ||||| || || |||||||| || | ||
Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTC 24623
Query 22978 CTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTTC 23037
||| | || || |||| | ||||||||| ||| ||||| | ||||||||||
Sbjct 24622 CTATTAGAGGA---GGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTC 24566
Query 23038 AGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACTGCTTATT 23097
| |||||||||||||| || || || || ||| || | || || ||||||||| | ||
Sbjct 24565 AAACTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTT 24506
Query 23098 ATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGTGTAG 23157
|||||||||||||||| ||||| || ||| | | ||||| |||||||| | ||| |||
Sbjct 24505 ATCCTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAG 24446
Query 23158 AAGAAAACCGCATTCGTCATATGGATTATGGTGTTCAACTGAAT 23201
|||| || || | | ||| | ||||| | | | ||| | |||
Sbjct 24445 AAGATAATCGAGTAAGACATGTAGATTACGCTATACAAATTAAT 24402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514396017078080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |