Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq2065080 185 9e-42 >seq2065080 Length=53610 Score = 185 bits (204), Expect = 9e-42 Identities = 321/464 (69%), Gaps = 12/464 (3%) Strand=Plus/Minus Query 22744 ATAGATTAAAACATGTTATTCGTTTTTATGAAGCAGTATCTACTCGACAGATTTCATTGC 22803 |||||||| | || ||| |||||||| || | |||||| || || | | Sbjct 24859 ATAGATTAGATTATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTAC 24800 Query 22804 CAACTCCTATTATGGCTGGTTGTCGTACTCCGACTCGACAGTTTAGTTCATGCGTTGTTA 22863 |||| || |||||||| ||| | ||||| ||| | || ||||| || || ||| | | Sbjct 24799 CAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAA 24740 Query 22864 TTGAGGCAGGTGATTCATTAAAGTCTATCAATAAGGCTTCCGCT---TCAATTGTTGAAT 22920 |||| | |||| ||| | ||||| ||| || | ||| ||||| || ||| Sbjct 24739 TTGAATGTGCTGATAATTTAGATTCTATTAAT---GCAACAGCTAGTTCAATAGTAAAAT 24683 Query 22921 ATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGC---CGAAGGTT 22977 || | ||| || | || |||||||| ||||| || || |||||||| || | || Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTC 24623 Query 22978 CTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTTC 23037 ||| | || || |||| | ||||||||| ||| ||||| | |||||||||| Sbjct 24622 CTATTAGAGGA---GGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTC 24566 Query 23038 AGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACTGCTTATT 23097 | |||||||||||||| || || || || ||| || | || || ||||||||| | || Sbjct 24565 AAACTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTT 24506 Query 23098 ATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGTGTAG 23157 |||||||||||||||| ||||| || ||| | | ||||| |||||||| | ||| ||| Sbjct 24505 ATCCTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAG 24446 Query 23158 AAGAAAACCGCATTCGTCATATGGATTATGGTGTTCAACTGAAT 23201 |||| || || | | ||| | ||||| | | | ||| | ||| Sbjct 24445 AAGATAATCGAGTAAGACATGTAGATTACGCTATACAAATTAAT 24402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514396017078080