Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq2065080 132 5e-26 >seq2065080 Length=53610 Score = 132 bits (146), Expect = 5e-26 Identities = 273/406 (67%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 140766 TTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTG 140825 ||||| | || | | | || || | ||| || | || || ||||| | ||| | || Sbjct 24400 TTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTA 24459 Query 140826 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 140885 || || | ||| | ||||| || ||||| |||||||||||||||||| | ||||||| Sbjct 24460 TTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCA 24519 Query 140886 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 140945 || || || | | ||||||||| || || ||||||||||| ||||| |||||||| || Sbjct 24520 GCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAG 24579 Query 140946 AACGGAATAACACCAGT-----ATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAG 141000 || || ||| |||||| |||||| | || | | || || ||| ||| Sbjct 24580 AAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGA-----CAG 24634 Query 141001 CACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGATGATTG 141060 ||||||| || || || || || || ||||| | | | | ||||| | |||| Sbjct 24635 CACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTG 24694 Query 141061 AATTAGCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAAC 141120 || |||| || ||| || || | | ||||| ||| || | || || || | Sbjct 24695 AACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGC 24754 Query 141121 TGAACTGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGG 141166 | || || || ||||| ||||| | || ||||| || ||||| || Sbjct 24755 TAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGG 24800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524284695867520