Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq2065080 136 4e-27 >seq2065080 Length=53610 Score = 136 bits (150), Expect = 4e-27 Identities = 275/407 (68%), Gaps = 12/407 (3%) Strand=Plus/Plus Query 143094 TTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTG 143153 ||||||| || | | | || || | |||||| | || || ||||| | || | || Sbjct 24400 TTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTA 24459 Query 143154 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 143213 || || | ||| | ||||| || ||||| |||||||| | ||||||| | ||||||| Sbjct 24460 TTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCA 24519 Query 143214 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143273 || || || | | ||||||||| || |||||||||||||| ||||| |||||||| || Sbjct 24520 GCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAG 24579 Query 143274 AACGGAATAACACCAGTATGGCGAACTTCACC------CATACCGATTTTCGAACCTTCA 143327 || || ||| ||||||||| |||| || ||| || || ||| || Sbjct 24580 AAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATA-GGACTTCCGA-----CA 24633 Query 143328 GCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGATGATT 143387 |||||||| || || || || || || || || | | | | ||||| | ||| Sbjct 24634 GCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATT 24693 Query 143388 GAATTGGCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACAGGAA 143447 ||| | || || |||||| || | | |||||| ||| || | ||||| || Sbjct 24694 GAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAG 24753 Query 143448 CTGAACTGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGG 143494 || || ||||| ||||| ||||| | || ||||| || || || || Sbjct 24754 CTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGG 24800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525780928087840