Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_028940.1
Length=170286
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 107 2e-18
>seq2065080
Length=53610
Score = 107 bits (118), Expect = 2e-18
Identities = 278/418 (67%), Gaps = 18/418 (4%)
Strand=Plus/Plus
Query 145248 ATTGATTTGAATTCCATAATCAAGATGCCTGATTCGATTTTCTTCTACGCCTTTGTTGTT 145307
||| ||||| || | ||||| | ||| || | |||||| ||||||| ||| | || ||
Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461
Query 145308 TTTAAGGACTAAAAGATTTTCTGCTTCAAGGTGCCACATTGGGTAATATAATGTTGCCGC 145367
||| | ||||| | ||| ||| |||| | ||||| || || ||| | | || || ||
Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521
Query 145368 ACCACCACGAATTCCACCTTGAGAACAACTTTTAACAGAAG---CCAAGTGAGTTTTCCA 145424
||| || | || |||||||||||| || |||||||| || || || ||| |
Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATG---TTTGTA 24578
Query 145425 GAATGGAATAACACCCGTATGCCGCACTTCACCGTGACCAATCTTAGAACCTTCAGCGCG 145484
||| || ||| ||| ||||| |||| || | ||| | || |||| ||
Sbjct 24579 GAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACG 24638
Query 145485 ATACATT---CCGGCGTTAACACCAATACCAGCGCGTTTACTGATATATTTGA-TAATGC 145540
| ||| || | |||| ||||| || || | || | | |||||| | || ||
Sbjct 24639 A---ATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGA 24695
Query 145541 TTTCGTTCACTTTG--TTAATTGAATTTAGCGAATCGCCACCTTCAATTACTACACATGA 145598
| | | ||| ||||| |||| || ||| ||| |||||||| ||||| ||
Sbjct 24696 ACTAGCT---GTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGA 24752
Query 145599 ACTGAATTGACGAGTTGGTGTACGTACACCTGCCATAATAGGAGTAGGCAAAGAAATT 145656
|| ||||| | ||| || || | ||||||||||||||| || || || | ||| |||
Sbjct 24753 GCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATT 24810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524130762511520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |