Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_028940.1 Length=170286 Score E Sequences producing significant alignments: (Bits) Value seq2065080 107 2e-18 >seq2065080 Length=53610 Score = 107 bits (118), Expect = 2e-18 Identities = 278/418 (67%), Gaps = 18/418 (4%) Strand=Plus/Plus Query 145248 ATTGATTTGAATTCCATAATCAAGATGCCTGATTCGATTTTCTTCTACGCCTTTGTTGTT 145307 ||| ||||| || | ||||| | ||| || | |||||| ||||||| ||| | || || Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 145308 TTTAAGGACTAAAAGATTTTCTGCTTCAAGGTGCCACATTGGGTAATATAATGTTGCCGC 145367 ||| | ||||| | ||| ||| |||| | ||||| || || ||| | | || || || Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 145368 ACCACCACGAATTCCACCTTGAGAACAACTTTTAACAGAAG---CCAAGTGAGTTTTCCA 145424 ||| || | || |||||||||||| || |||||||| || || || ||| | Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATG---TTTGTA 24578 Query 145425 GAATGGAATAACACCCGTATGCCGCACTTCACCGTGACCAATCTTAGAACCTTCAGCGCG 145484 ||| || ||| ||| ||||| |||| || | ||| | || |||| || Sbjct 24579 GAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACG 24638 Query 145485 ATACATT---CCGGCGTTAACACCAATACCAGCGCGTTTACTGATATATTTGA-TAATGC 145540 | ||| || | |||| ||||| || || | || | | |||||| | || || Sbjct 24639 A---ATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGA 24695 Query 145541 TTTCGTTCACTTTG--TTAATTGAATTTAGCGAATCGCCACCTTCAATTACTACACATGA 145598 | | | ||| ||||| |||| || ||| ||| |||||||| ||||| || Sbjct 24696 ACTAGCT---GTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGA 24752 Query 145599 ACTGAATTGACGAGTTGGTGTACGTACACCTGCCATAATAGGAGTAGGCAAAGAAATT 145656 || ||||| | ||| || || | ||||||||||||||| || || || | ||| ||| Sbjct 24753 GCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATT 24810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524130762511520