Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_029013.1
Length=177688
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 140 4e-28
>seq2065080
Length=53610
Score = 140 bits (154), Expect = 4e-28
Identities = 242/352 (69%), Gaps = 0/352 (0%)
Strand=Plus/Plus
Query 77232 CCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATAC 77291
||| | || ||||| | ||| | || || || ||||| |||||||| || |||||| ||
Sbjct 24451 CCTCTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAAC 24510
Query 77292 AACGTTGCAGCACCACCACGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATA 77351
| || |||||||| || | ||| |||||||| || ||||||||||| || || |||| |
Sbjct 24511 AGAGTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAA 24570
Query 77352 TGTTTCCAGAACGGGATCACGCCTGTATGTACTGCTTCACCACCACGGATTTTAGAACCC 77411
||||| |||| || || || ||||| | |||||| || || | || | ||
Sbjct 24571 TGTTTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCG 24630
Query 77412 ATTGCGCGAATGTGTCCAGCATTAACACCGATACCCGCGCGTTGTGAAATATACTTCACG 77471
| || ||||| || || |||||| || || || || | ||| || | ||| || ||
Sbjct 24631 ACAGCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACT 24690
Query 77472 ATCGCAGAGGTTACAGCATTCAGAGAACCCAGTGAATCACCTGATTCAATCACTACGCAA 77531
|| | | | | ||||| | |||| | | |||| | ||||||| | || |||
Sbjct 24691 ATTGAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAA 24750
Query 77532 CTGGAAAACTGACGCGTAGGAGTACGCACACCCGCCATAATAGGCGTAGGTA 77583
| ||| || | |||||||| | ||||| |||||||| || || ||||
Sbjct 24751 GAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTA 24802
Score = 91.5 bits (100), Expect = 2e-13
Identities = 203/302 (67%), Gaps = 2/302 (1%)
Strand=Plus/Plus
Query 75534 ATATGCGTATAACTGCGACTGTGAATTGTTTCACTGAAAGCCCATGTTTCGATCCACGTT 75593
||||| |||||| ||| || || |||||| || | ||| ||||| ||||| |||
Sbjct 22716 ATATGAGTATAAGATCGAGAATGTATAGTTTCAGAAAATGACCAAGTTTCAATCCATGTT 22775
Query 75594 TCCA-TTGAAACATCAGAGGCAATCGGGAGAAACGCCAGGTTAGGGCCGCGTCCCTGAAT 75652
|| | || | || || ||| || | ||| || | || || | | ||| |||||
Sbjct 22776 TCTAATTCAGGTATT-GATACAACAGGCAAAAAAGCTATATTTGGACTTCTTCCTTGAAT 22834
Query 75653 GGTATCTAACAGGGTTTGATATTGCAGGTTAGAATCAAAAATGATTTTTTCGTGTTCCGG 75712
| ||||| | ||||||||||| | ||| ||||||| |||||| |||| ||
Sbjct 22835 TGAATCTAGTAAGGTTTGATATTTTAAATTACTTAAAAAAATGTGTTTTTCATGTTTTGG 22894
Query 75713 CATTTTTGCATACTGCATACGGTCTATCGACAGATCCACTTCTTCCGGTCGCCAGAAGAA 75772
|| || | | | || || ||| | || | ||| | |||||| |||| ||| || ||
Sbjct 22895 CAAATTGTTAAAATCTATTCGATCTTTAGATAAATCTATTTCTTCAGGTCTCCAAAAAAA 22954
Query 75773 TGACAGTTGTTTTTCAGTCAAAGTTTCGAATACGCGATGTTTTTGTTCTTCATATCGGGC 75832
|| ||||||||||| | || |||| || | || |||||||| ||||||| ||
Sbjct 22955 AGAAAGTTGTTTTTCTATTAATTTTTCAAAAATTATATATTTTTGTTGATCATATCTGGA 23014
Query 75833 AA 75834
||
Sbjct 23015 AA 23016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546919056533760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |