Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq2065080 140 4e-28 >seq2065080 Length=53610 Score = 140 bits (154), Expect = 4e-28 Identities = 242/352 (69%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 77232 CCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATAC 77291 ||| | || ||||| | ||| | || || || ||||| |||||||| || |||||| || Sbjct 24451 CCTCTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAAC 24510 Query 77292 AACGTTGCAGCACCACCACGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATA 77351 | || |||||||| || | ||| |||||||| || ||||||||||| || || |||| | Sbjct 24511 AGAGTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAA 24570 Query 77352 TGTTTCCAGAACGGGATCACGCCTGTATGTACTGCTTCACCACCACGGATTTTAGAACCC 77411 ||||| |||| || || || ||||| | |||||| || || | || | || Sbjct 24571 TGTTTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCG 24630 Query 77412 ATTGCGCGAATGTGTCCAGCATTAACACCGATACCCGCGCGTTGTGAAATATACTTCACG 77471 | || ||||| || || |||||| || || || || | ||| || | ||| || || Sbjct 24631 ACAGCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACT 24690 Query 77472 ATCGCAGAGGTTACAGCATTCAGAGAACCCAGTGAATCACCTGATTCAATCACTACGCAA 77531 || | | | | ||||| | |||| | | |||| | ||||||| | || ||| Sbjct 24691 ATTGAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAA 24750 Query 77532 CTGGAAAACTGACGCGTAGGAGTACGCACACCCGCCATAATAGGCGTAGGTA 77583 | ||| || | |||||||| | ||||| |||||||| || || |||| Sbjct 24751 GAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTA 24802 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/302 (67%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 75534 ATATGCGTATAACTGCGACTGTGAATTGTTTCACTGAAAGCCCATGTTTCGATCCACGTT 75593 ||||| |||||| ||| || || |||||| || | ||| ||||| ||||| ||| Sbjct 22716 ATATGAGTATAAGATCGAGAATGTATAGTTTCAGAAAATGACCAAGTTTCAATCCATGTT 22775 Query 75594 TCCA-TTGAAACATCAGAGGCAATCGGGAGAAACGCCAGGTTAGGGCCGCGTCCCTGAAT 75652 || | || | || || ||| || | ||| || | || || | | ||| ||||| Sbjct 22776 TCTAATTCAGGTATT-GATACAACAGGCAAAAAAGCTATATTTGGACTTCTTCCTTGAAT 22834 Query 75653 GGTATCTAACAGGGTTTGATATTGCAGGTTAGAATCAAAAATGATTTTTTCGTGTTCCGG 75712 | ||||| | ||||||||||| | ||| ||||||| |||||| |||| || Sbjct 22835 TGAATCTAGTAAGGTTTGATATTTTAAATTACTTAAAAAAATGTGTTTTTCATGTTTTGG 22894 Query 75713 CATTTTTGCATACTGCATACGGTCTATCGACAGATCCACTTCTTCCGGTCGCCAGAAGAA 75772 || || | | | || || ||| | || | ||| | |||||| |||| ||| || || Sbjct 22895 CAAATTGTTAAAATCTATTCGATCTTTAGATAAATCTATTTCTTCAGGTCTCCAAAAAAA 22954 Query 75773 TGACAGTTGTTTTTCAGTCAAAGTTTCGAATACGCGATGTTTTTGTTCTTCATATCGGGC 75832 || ||||||||||| | || |||| || | || |||||||| ||||||| || Sbjct 22955 AGAAAGTTGTTTTTCTATTAATTTTTCAAAAATTATATATTTTTGTTGATCATATCTGGA 23014 Query 75833 AA 75834 || Sbjct 23015 AA 23016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546919056533760