Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq2065080 167 2e-36 >seq2065080 Length=53610 Score = 167 bits (184), Expect = 2e-36 Identities = 303/441 (69%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 41876 TTTTATGATGCCGTTTCTACTCATCAAGTTTCATTGCCAACCCCAATTATGGCAGGTGCT 41935 |||||||| || |||||||| | | | || | ||||| || ||||||||||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 41936 CGTACTCCGACTCGCCAGTTCTCTAG---TTGTGTAGTTATTGAAGCCGGTGATTCGTTA 41992 | ||||| ||| | || || ||| |||||| | |||||| | |||| ||| Sbjct 24776 AGAACTCCTACTAGGCAATT---TAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720 Query 41993 AAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTATC 42052 | |||||||| ||| | ||||| | ||||| | ||| || |||| || || Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 42053 GGTATCAACGTTGGTATGCTTCGTGCAGAAGG---TTCTAAGATCGGTATGGGTGAAGTT 42109 || || || || || ||||||| | || | ||| | || || | | || Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 42110 CGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCT 42169 | |||| ||| ||| || |||| |||||||| |||||||| || ||||| || ||| Sbjct 24599 C---ATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCT 24543 Query 42170 CAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTA 42229 |||||||| || | || ||||||||||| || |||||| || ||||| ||||||||| Sbjct 24542 CAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTA 24483 Query 42230 GAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATG 42289 ||||| | |||||| | |||||||| | ||| | || || || || | ||||| | Sbjct 24482 GAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTA 24423 Query 42290 GACTACGGAATTCAGATTAAT 42310 || |||| || || |||||| Sbjct 24422 GATTACGCTATACAAATTAAT 24402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519466581824720