Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_029091.1
Length=168771
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 167 2e-36
>seq2065080
Length=53610
Score = 167 bits (184), Expect = 2e-36
Identities = 303/441 (69%), Gaps = 12/441 (3%)
Strand=Plus/Minus
Query 41876 TTTTATGATGCCGTTTCTACTCATCAAGTTTCATTGCCAACCCCAATTATGGCAGGTGCT 41935
|||||||| || |||||||| | | | || | ||||| || |||||||||||||
Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777
Query 41936 CGTACTCCGACTCGCCAGTTCTCTAG---TTGTGTAGTTATTGAAGCCGGTGATTCGTTA 41992
| ||||| ||| | || || ||| |||||| | |||||| | |||| |||
Sbjct 24776 AGAACTCCTACTAGGCAATT---TAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720
Query 41993 AAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTATC 42052
| |||||||| ||| | ||||| | ||||| | ||| || |||| || ||
Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660
Query 42053 GGTATCAACGTTGGTATGCTTCGTGCAGAAGG---TTCTAAGATCGGTATGGGTGAAGTT 42109
|| || || || || ||||||| | || | ||| | || || | | ||
Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600
Query 42110 CGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCT 42169
| |||| ||| ||| || |||| |||||||| |||||||| || ||||| || |||
Sbjct 24599 C---ATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCT 24543
Query 42170 CAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTA 42229
|||||||| || | || ||||||||||| || |||||| || ||||| |||||||||
Sbjct 24542 CAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTA 24483
Query 42230 GAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATG 42289
||||| | |||||| | |||||||| | ||| | || || || || | ||||| |
Sbjct 24482 GAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTA 24423
Query 42290 GACTACGGAATTCAGATTAAT 42310
|| |||| || || ||||||
Sbjct 24422 GATTACGCTATACAAATTAAT 24402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 519466581824720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |