Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq2062996 140 3e-28 >seq2062996 Length=51343 Score = 140 bits (154), Expect = 3e-28 Identities = 366/546 (67%), Gaps = 17/546 (3%) Strand=Plus/Plus Query 125931 GCAATAGGTGCTTTAATAGCAGGGTGTGATTCATAATTTATCAATTCTAAATCTTCATAA 125990 || ||| ||||||||||||||| | | || ||| || || | || ||||||| | | Sbjct 22805 GCTATAATTGCTTTAATAGCAGGATAAGGTTGATAGTTAATAATTTTAAAATCTTTAAAT 22864 Query 125991 TTAATATCAAAAATTGATTTATCTGTATTA---ATTTTTAATTGAGGTGGTAGATAACTA 126047 ||| ||||||||| ||||| | |||| || ||||||||||| | | ||| Sbjct 22865 TTATAATCAAAAATAGATTTTGGTTTATTTTGTATAATTAATTGAGGTAAT---TTTCTA 22921 Query 126048 TCTCTT--GATAATTGTGTATGTATTGC--ATCC-ATATGATTGGAATAAATATGTGCAT 126102 | || || |||| ||| ||| | || || || ||||| ||| | ||| | | Sbjct 22922 GGTTTTCTGAGAATT-TGT-TGTTTAGCTAATGAGATGTGATTTTTATATAAATGAACGT 22979 Query 126103 CTCCAAATGTATGAATGAATTCACCCACCT-CAAGTCCACATTCTTTTGCAACAAGATGT 126161 |||| ||| || ||||| || ||| | |||| || | | | |||| Sbjct 22980 CTCCTCCTGTCCAAAGCAATTCTCCTGGAAACAAATTG-CATTGTTGAGATATCATATGT 23038 Query 126162 GTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTT 126221 | |||| ||||| ||||| ||||| ||||| | |||| ||| |||||| | | | Sbjct 23039 ATGAGTATGGCATAGCTTGCTATATTAAAAGGTAATCCTATAAAAATATCACTAGAACGT 23098 Query 126222 TGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAA 126281 ||||| | |||||| |||| || | | ||| ||||||||||| | | || ||| Sbjct 23099 TGATAAATTTGACAGCTTAAAGTATTGTTTAGTATATAAAATTGAAATAATACATGACAA 23158 Query 126282 GGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGA 126341 ||||||||||||||| | ||||| | |||||| || |||||||| | || | Sbjct 23159 GGTGGTAATGCCATTTTGTTAATTTCGCTTACATTCCAAGCAGAAACAATAATTCTTCTA 23218 Query 126342 GAGTTTGGATTGGTTTTAATTTGTTGTATAACTGATTTTAATTGATCGTAATGATTT-CC 126400 || || ||||| ||||||||| | ||| || ||| | |||||| || | ||| Sbjct 23219 GAATTAGGATTATTTTTAATTTCATCTATTACATTTTTAATTTGATC-TATTTTTTTGTT 23277 Query 126401 ATTTTTATCTTCCCAATCTCTCCATTGTTTACCATAAACATTCCCTAAGTTGCCATATTT 126460 | | |||||||||||| ||||||||| || ||||||| | ||||| | || | || Sbjct 23278 AGTATTATCTTCCCAAGATCTCCATTGCTTTCCATAAATAGGGCCTAAATCTCCCTTTTC 23337 Query 126461 TTTAGC 126466 ||||| Sbjct 23338 GTTAGC 23343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393493084337654