Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_031011.1
Length=168993
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 167 2e-36
>seq2065080
Length=53610
Score = 167 bits (184), Expect = 2e-36
Identities = 317/464 (68%), Gaps = 12/464 (3%)
Strand=Plus/Plus
Query 38198 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 38257
||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | |||||
Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461
Query 38258 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 38317
||| ||||| | | ||| || ||||| |||||||||||||||||| | |||||||||
Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521
Query 38318 GCCGCCACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAA 38377
|| || | || ||| || || || || || ||||| |||| ||||||||||| | ||
Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581
Query 38378 AGGAATAACACCAGGATGGCATACATCACCCATGCCAATCTCAGAACCTTCG---GCACG 38434
||| ||| ||||| ||| || | || || | ||| || || | || |||||
Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAAT---AGGACTTCCGACAGCACG 24638
Query 38435 AATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA--- 38491
||| || || ||||| |||||||| || | || ||| | ||||| || |||||
Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698
Query 38492 AGCGGAAGCCTTATTGATAGACTTCAATGAATCACCTGCCTCAATAACAACACATGAACT 38551
||| | || ||| ||||| | || |||| | ||||| | |||||| || ||
Sbjct 24699 AGCTGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCT 24755
Query 38552 AAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCG 38611
||| || | ||| ||||| | ||| |||||||| || ||||| | || ||
Sbjct 24756 AAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAA 24815
Query 38612 AGTAGATACTGCTTCATAAAAACGGATAACATGTTTTAATCTAT 38655
|||||| | || |||||||| ||| || | ||||||||
Sbjct 24816 AGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTAT 24859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520150045925360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |