Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031011.1 Length=168993 Score E Sequences producing significant alignments: (Bits) Value seq2065080 167 2e-36 >seq2065080 Length=53610 Score = 167 bits (184), Expect = 2e-36 Identities = 317/464 (68%), Gaps = 12/464 (3%) Strand=Plus/Plus Query 38198 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 38257 ||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 38258 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 38317 ||| ||||| | | ||| || ||||| |||||||||||||||||| | ||||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 38318 GCCGCCACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAA 38377 || || | || ||| || || || || || ||||| |||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 38378 AGGAATAACACCAGGATGGCATACATCACCCATGCCAATCTCAGAACCTTCG---GCACG 38434 ||| ||| ||||| ||| || | || || | ||| || || | || ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAAT---AGGACTTCCGACAGCACG 24638 Query 38435 AATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA--- 38491 ||| || || ||||| |||||||| || | || ||| | ||||| || ||||| Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698 Query 38492 AGCGGAAGCCTTATTGATAGACTTCAATGAATCACCTGCCTCAATAACAACACATGAACT 38551 ||| | || ||| ||||| | || |||| | ||||| | |||||| || || Sbjct 24699 AGCTGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCT 24755 Query 38552 AAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCG 38611 ||| || | ||| ||||| | ||| |||||||| || ||||| | || || Sbjct 24756 AAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAA 24815 Query 38612 AGTAGATACTGCTTCATAAAAACGGATAACATGTTTTAATCTAT 38655 |||||| | || |||||||| ||| || | |||||||| Sbjct 24816 AGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520150045925360