Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq2065080 93.3 4e-14 seq1898082 89.7 5e-13 >seq2065080 Length=53610 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 137292 GTTCCGCATAATATGAGTATAAGAACGAGAATGAATTGTTTCGCTGAATGTCCATGTTTG 137351 ||| || || |||||||||||||| |||||||| || ||||| |||| ||| |||| Sbjct 22706 GTTTCGAATTATATGAGTATAAGATCGAGAATGTATAGTTTCAGAAAATGACCAAGTTTC 22765 Query 137352 AACCCATGTTTC-AAAGCCGACATCAGAGATCAAC-GGCGCAAATGCCAGAGCTGGAGCT 137409 || ||||||||| || | | || || | |||| ||| ||| || | | |||| | Sbjct 22766 AATCCATGTTTCTAATTCAGGTAT-TGATA-CAACAGGCAAAAAAGCTATATTTGGACTT 22823 Query 137410 CGTCCTTGAATAGAATCAAGCAGTGTCTGATATTTTAAGTTATCGGTAAAAATACCCTTT 137469 | ||||||||| ||||| || | || ||||||||||| ||| |||||| ||| Sbjct 22824 CTTCCTTGAATTGAATCTAGTAAGGTTTGATATTTTAAATTACTTAAAAAAATGTGTTTT 22883 Query 137470 TCATGTT 137476 ||||||| Sbjct 22884 TCATGTT 22890 >seq1898082 Length=53401 Score = 89.7 bits (98), Expect = 5e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 66413 TACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAGCTA 66472 ||||||||| ||||||||||||||| ||||||||||| | ||||||||||| |||||||| Sbjct 33823 TACAGGATTTGAACCTGTGACCTACAGCTTAGAAGGCTGCTGCTCTATCCAACTGAGCTA 33764 Query 66473 AGAGTGC 66479 | || || Sbjct 33763 AAAGCGC 33757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502318405966320