Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_031030.1
Length=170788
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 190 2e-43
>seq2065080
Length=53610
Score = 190 bits (210), Expect = 2e-43
Identities = 308/439 (70%), Gaps = 8/439 (2%)
Strand=Plus/Plus
Query 139475 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 139534
||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | |||||
Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461
Query 139535 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 139594
||| ||||| | | ||| || ||||| |||||||||||||||||| | |||||||||
Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521
Query 139595 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAA 139654
|| || | || |||||| || || || |||||||| ||||| ||||||||||| | ||
Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581
Query 139655 AGGAATAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAAT 139714
||| ||| |||||||||| | |||| || | ||| | || ||||||||||
Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641
Query 139715 CATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA---AGC 139771
|| |||||||| |||||||| || | || ||| | ||||| || ||||| |||
Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGC 24701
Query 139772 GGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCATGAACTAAA 139831
| || ||| ||||| | || ||| | ||||| | || || || |||||
Sbjct 24702 TGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758
Query 139832 CTGCCGAGTTGGAGTAC-GACAGCCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAG 139890
|||| ||| ||||| | ||| || |||||||| || ||||||| || || ||
Sbjct 24759 TTGCCTAGTAGGAGTTCTTACA-CCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAG 24817
Query 139891 TAGATACCGCTTCATAAAA 139909
|||| | || ||||||||
Sbjct 24818 TAGAAATAGCGTCATAAAA 24836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 525676253405760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |