Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq2065080 178 1e-39 >seq2065080 Length=53610 Score = 178 bits (196), Expect = 1e-39 Identities = 307/445 (69%), Gaps = 6/445 (1%) Strand=Plus/Minus Query 151944 ATAGATTAAAACATGTTATCCGTTTTTATGAAGCAGTATCTACTCGACAGATTTCATTGC 152003 |||||||| | || ||| |||||||| || | |||||| || || | | Sbjct 24859 ATAGATTAGATTATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTAC 24800 Query 152004 CAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTTCATGCGTTGTTA 152063 |||| || |||||||| ||| | ||||||||| | || || || || || ||| | | Sbjct 24799 CAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAA 24740 Query 152064 TTGAGGCAGGAGATTCGCTGAAGTCTATCAATAAGGCTTCTGCTTCAATTGTTGAATATA 152123 |||| | ||| | | ||||| ||| | || |||||| || ||||| Sbjct 24739 TTGAATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATG 24680 Query 152124 TCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGC---CGAAGGTTCTA 152180 | || || |||| ||||| || ||||| || || |||||||| || | || ||| Sbjct 24679 TATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTA 24620 Query 152181 AGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGA 152240 | || || |||| | ||||||||| ||| ||||| | ||||||||||| | Sbjct 24619 TTAGAGGA---GGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAA 24563 Query 152241 CTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACTGCTTATTATC 152300 ||||||||||||| ||||| || |||||| || | || || ||||||||| | ||||| Sbjct 24562 CTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATC 24503 Query 152301 CTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAAG 152360 ||||||||||||| ||||| || ||| | | ||||| |||||||| | ||| |||||| Sbjct 24502 CTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAG 24443 Query 152361 AAAACCGCATCCGTCATATGGATTA 152385 | || || | | ||| | ||||| Sbjct 24442 ATAATCGAGTAAGACATGTAGATTA 24418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525620837397600