Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_031065.1
Length=159878
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 158 1e-33
>seq2065080
Length=53610
Score = 158 bits (174), Expect = 1e-33
Identities = 302/440 (69%), Gaps = 10/440 (2%)
Strand=Plus/Plus
Query 132582 ATTGATTTGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTT 132641
||| ||||| | | | ||||||| ||| | | || || || |||| ||| | || ||
Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461
Query 132642 CTTTAATACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGC 132701
||||| || | || || || ||||||| |||||| || |||||| | |||||||| ||
Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521
Query 132702 ACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAA 132761
||| || | || || |||||||| || ||||| || ||||| ||||||||||| | ||
Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581
Query 132762 AGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAAT 132821
||| || |||||||| | |||| || | ||| || |||| |||||
Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641
Query 132822 CATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTT--A 132879
|| | || || || || || ||| ||| ||| |||| | || |||| || |
Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCT--CTT--TGAGATACAT-ATTTTACTATTGAA 24696
Query 132880 CT---TGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTA 132936
|| || ||||||||||||| | ||| || ||| || | |||||||| |||
Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756
Query 132937 AATTGACGAGTAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCTGTCGA 132996
||||| | ||||||||| | | || |||||||| ||||| |||| || || |
Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAA 24816
Query 132997 GTAGATACAGCATCATAAAA 133016
||||| | ||| ||||||||
Sbjct 24817 GTAGAAATAGCGTCATAAAA 24836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 492087995126560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |