Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq2065080 158 1e-33 >seq2065080 Length=53610 Score = 158 bits (174), Expect = 1e-33 Identities = 302/440 (69%), Gaps = 10/440 (2%) Strand=Plus/Plus Query 132582 ATTGATTTGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTT 132641 ||| ||||| | | | ||||||| ||| | | || || || |||| ||| | || || Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 132642 CTTTAATACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGC 132701 ||||| || | || || || ||||||| |||||| || |||||| | |||||||| || Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 132702 ACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAA 132761 ||| || | || || |||||||| || ||||| || ||||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 132762 AGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAAT 132821 ||| || |||||||| | |||| || | ||| || |||| ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641 Query 132822 CATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAATAATACTGTT--A 132879 || | || || || || || ||| ||| ||| |||| | || |||| || | Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCT--CTT--TGAGATACAT-ATTTTACTATTGAA 24696 Query 132880 CT---TGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTA 132936 || || ||||||||||||| | ||| || ||| || | |||||||| ||| Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756 Query 132937 AATTGACGAGTAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCTGTCGA 132996 ||||| | ||||||||| | | || |||||||| ||||| |||| || || | Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAA 24816 Query 132997 GTAGATACAGCATCATAAAA 133016 ||||| | ||| |||||||| Sbjct 24817 GTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492087995126560