Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq2065080 149 6e-31 >seq2065080 Length=53610 Score = 149 bits (164), Expect = 6e-31 Identities = 295/437 (68%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 141252 TTATTAATCTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTG 141311 |||||||| || | | ||||||| ||| | | || || || |||| ||| | || Sbjct 24400 TTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTA 24459 Query 141312 TTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCC 141371 || || | || | | || || ||||| || ||||| || ||||| |||| || || Sbjct 24460 TTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCA 24519 Query 141372 GCGCCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAG 141431 || || || | ||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct 24520 GCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAG 24579 Query 141432 AAAGGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGA 141491 ||||| ||| |||||||| |||| || || ||| || | || ||| Sbjct 24580 AAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGA 24639 Query 141492 ATCATGCCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCA 141551 || ||| ||||||| ||||| ||||| | | | | ||||| ||||| | Sbjct 24640 ATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTA 24699 Query 141552 GCAGCTTCGTTAATTGAATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGAAC 141611 || | | | ||||| |||| | | ||||| ||| |||||| | || || || || || Sbjct 24700 GCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAAT 24759 Query 141612 TGGCGTGTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTTTTTAGTA 141671 || | || ||||| | ||||| | |||||| |||||||| | || || | |||| Sbjct 24760 TGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTA 24819 Query 141672 GAAACTGCATCATAGAA 141688 |||| || ||||| || Sbjct 24820 GAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517930326931840