Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq2065080 161 1e-34 >seq2065080 Length=53610 Score = 161 bits (178), Expect = 1e-34 Identities = 302/441 (68%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 61699 TTTTATGATGCCGTTTCTACTCATCAAGTTTCATTGCCTACTCCAATTATGGCAGGTGCT 61758 |||||||| || |||||||| | | | || | || || || ||||||||||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 61759 CGTACTCCGACTCGCCAGTTCTCTAG---TTGTGTAGTTATTGAAGCCGGTGATTCGTTA 61815 | ||||| ||| | || || ||| |||||| | |||||| | |||| ||| Sbjct 24776 AGAACTCCTACTAGGCAATT---TAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720 Query 61816 AAATCTATTAACAAAACTTCAGCATCAATTATTGAATATATTTCTAAACGAGCTGGTATA 61875 | |||||||| ||| | ||||| | ||||| | ||| || |||| || || Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 61876 GGTATCAACGTTGGTATGCTTCGTGCAGAAGG---TTCTAAGATCGGTATGGGCGAAGTT 61932 || || || || || ||||||| | || | ||| | || || | | || Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 61933 CGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCT 61992 | |||| ||| ||| || |||| |||||||| |||||||| || ||||| || ||| Sbjct 24599 C---ATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCT 24543 Query 61993 CAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTA 62052 |||||||| || | || ||||||||||| || |||||| || ||||| ||||||||| Sbjct 24542 CAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTA 24483 Query 62053 GAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATG 62112 ||||| | |||||| | |||||||| | ||| | || || || || | ||||| | Sbjct 24482 GAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTA 24423 Query 62113 GACTACGGAATTCAGATTAAT 62133 || |||| || || |||||| Sbjct 24422 GATTACGCTATACAAATTAAT 24402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522083448876720