Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031128.1 Length=158081 Score E Sequences producing significant alignments: (Bits) Value seq2065080 84.2 2e-11 >seq2065080 Length=53610 Score = 84.2 bits (92), Expect = 2e-11 Identities = 183/273 (67%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 17387 CCGCCTTGAGAGCAAGACTTCAGGGCACCAGTC---AAATACTTGATGAATGGAACCAGA 17443 || ||||||||||| || || | || |||| |||| ||| ||| || | | Sbjct 24535 CCACCTTGAGAGCAGGATTTAA---CAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAA 24591 Query 17444 CCTGTATGGACCATTTCCCCTTTACGGATAGGGCTACCGATGCCACGAATTGCCCCAACA 17503 || ||||| | ||||||| | ||||| || |||| |||||||| ||| ||| Sbjct 24592 CCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACA 24651 Query 17504 TCGAATCCGATGCCAGCACGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTA 17563 | | ||| || || || | || || ||||| | || || | || || |||||| Sbjct 24652 TTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGCATTA 24711 Query 17564 ATTGAGTCCAATGTATCACCAGTTTTGATTAATACACAAGAGCTGAACTGTCGGGTCGGG 17623 || || || || ||||| || || ||||| ||||||||||| || || | || || Sbjct 24712 ATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGA 24771 Query 17624 GTGCGGACGCCGGACATAATAGGTGTTGGAAGA 17656 || | || || | |||||| |||||||| ||| Sbjct 24772 GTTCTTACACCTGCCATAATCGGTGTTGGTAGA 24804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 486555630311920