Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq2065080 168 7e-37 >seq2065080 Length=53610 Score = 168 bits (186), Expect = 7e-37 Identities = 247/347 (71%), Gaps = 2/347 (1%) Strand=Plus/Plus Query 143431 TTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTA 143490 || ||||| | ||| | || ||| || ||||| |||||||||||||||||| | |||| Sbjct 24457 TTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTA 24516 Query 143491 GCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTC 143550 ||||| || || | | ||||||||| || || |||||||||||||| || |||||||| Sbjct 24517 GCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTG 24576 Query 143551 CAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCA 143610 |||| || ||| ||| ||||| |||| || | |||| || || ||||| Sbjct 24577 TAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCA 24636 Query 143611 CGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAG 143670 ||||| || || || || ||||| || || | || ||| | |||| | |||||| Sbjct 24637 CGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAA 24696 Query 143671 TTAGCAGTTTTGTTAATAG-ATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACT 143729 |||| ||| ||||||| || | | | | || | |||||| | |||||||| || Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTA-TCAGCACATTCAATTAAAACACAAGAGCT 24755 Query 143730 AAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTA 143776 |||||| | || || || | | | || |||||||| || ||||||| Sbjct 24756 AAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTA 24802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523053229019520