Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq2065080 161 1e-34 >seq2065080 Length=53610 Score = 161 bits (178), Expect = 1e-34 Identities = 242/344 (70%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 142512 TTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTA 142571 || ||||| | ||| | || ||| || ||||| |||||||||||||||||| | |||| Sbjct 24457 TTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTA 24516 Query 142572 GCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTC 142631 ||||| || || | | ||||||||| || || |||||||||||||| || |||||||| Sbjct 24517 GCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTG 24576 Query 142632 CAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCA 142691 |||| || ||| ||| ||||| |||| || | |||| || || ||||| Sbjct 24577 TAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCA 24636 Query 142692 CGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAG 142751 ||||| || || || || ||||| ||||| | || ||| | |||| | |||||| Sbjct 24637 CGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAA 24696 Query 142752 TTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAACTA 142811 |||| ||| |||||||| | | || | |||||| | |||||||| ||| Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756 Query 142812 AATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGG 142855 ||||| | || || || | | | || |||||||| || || || Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGG 24800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519953011229680