Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq369028 87.8 2e-12 >seq369028 Length=352451 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 ||| || ||||| | || | ||| || | ||| | || ||||||||||| | |||||| Sbjct 63457 TCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGGCACAATACC 63516 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 ||| |||| ||||| || || |||||| || | | |||||||| ||| | ||| Sbjct 63517 ATTCGATGTGCCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTTATGTACTGA 63576 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 | ||| | || || || ||| |||| || ||| |||| |||||||| || Sbjct 63577 AACACCAAGTCCTCCAGCTGATTTGCTTATTACGGCACATTCCTTTAGAGTATCATATAT 63636 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 54406 ||||| || |||||||| |||| || || || |||||| Sbjct 63637 CCCCTCAATGCTATCATCTTTCATACAAACAAGGAAGCAGCTA 63679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562157155552560