Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq369028 100 4e-16 >seq369028 Length=352451 Score = 100 bits (110), Expect = 4e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| || ||||| | || | ||| || | ||| | || ||||||||||| | |||||| Sbjct 63457 TCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGGCACAATACC 63516 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| ||||| ||||| || || |||||| || | |||||||||| ||| | ||| Sbjct 63517 ATTCGATGTGCCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTTATGTACTGA 63576 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 | ||| | ||| || || ||| |||| || ||| |||| |||||||| || Sbjct 63577 AACACCAAGTCCTCCAGCTGATTTGCTTATTACGGCACATTCCTTTAGAGTATCATATAT 63636 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 ||||| || |||||||| |||| || || || |||||| Sbjct 63637 CCCCTCAATGCTATCATCTTTCATACAAACAAGGAAGCAGCTA 63679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623181890485480