Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12734 82.4 6e-11 >seq12734 Length=494798 Score = 82.4 bits (90), Expect = 6e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||||||||| | |||||| |||| ||| || | |||| || | || || |||||||| Sbjct 183912 CTCCTTTTGAATATTGTAGTCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCAAA 183853 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| ||||| || || | || | |||||||| || |||| | || || | Sbjct 183852 GATCAGACGCTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTAACATT 183793 Query 43038 GCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 ||| ||||| | ||| ||| || || | || || || || || || || ||||| | Sbjct 183792 ATCAATGGTGTC-CGAGCTCTCAACTTCCAAAGTAATTGTCTTACCAGTGAGGGTTTTAA 183734 Query 43097 CAAAAATTTGCATT 43110 |||||||||||||| Sbjct 183733 CAAAAATTTGCATT 183720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361601451823626