Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6377 116 4e-21 seq8179 107 2e-18 seq12734 105 6e-18 seq562416 98.7 1e-15 seq23608 98.7 1e-15 seq208113 96.9 3e-15 seq5369 95.1 1e-14 seq74129 89.7 5e-13 seq99438 87.8 2e-12 seq47591 87.8 2e-12 seq6925 87.8 2e-12 seq1025 87.8 2e-12 >seq6377 Length=1564332 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 1467434 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCG 1467493 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | |||||||| ||||| |||||| ||||||| | ||||||||||| || Sbjct 1467494 AGAGTGCGTCCA-TCTTCGAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCGGGTGG 1467552 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| || | | || | ||||| | | ||| || Sbjct 1467553 AATCCCTTCCTTGTCTTGAATTTTAGCCTTGACGTTGTCAATTGTGTCAGAGCTTTCGAC 1467612 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || |||||||||| ||||| || || || ||||| Sbjct 1467613 TTCCAGAGTGATTGTTTTGCCGGTCAGGGTTTTGACAAAGATCTGCAT 1467660 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 1323404 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCGGCG 1323345 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | || ||||| ||||| |||||| ||||||| | ||||||||||| || Sbjct 1323344 AGAGTGCGTCCA-TCCTCGAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCGGGTGG 1323286 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| || | | || | ||||| | | ||| || Sbjct 1323285 AATCCCTTCCTTGTCTTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGAGCTTTCAAC 1323226 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || ||||| |||| ||||| || || || ||||| Sbjct 1323225 TTCCAGAGTGATTGTTTTGCCCGTCAGGGTTTTGACAAAGATCTGCAT 1323178 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | || | |||| || ||||| || || |||||||||||| Sbjct 1323176 CCTCCTCTGAGACGGAGGACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCG 1323117 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| |||||| ||||||| | ||||| ||||| || Sbjct 1323116 AGAGTGCGTCCGTCCTCGAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCGGGTGGA 1323057 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| || | | || | ||||| | | ||| ||| Sbjct 1323056 ATCCCTTCCTTGTCTTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGAGCTTTCAACT 1322997 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 1322996 TCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 1322950 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||| | |||||| || ||||| |||||||| ||| | || ||| ||||||||||| Sbjct 1467229 ATGCAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCGAGTTG 1467288 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 || || ||| |||||| | |||||||| ||||| || || || ||||| ||| || Sbjct 1467289 CTTCCCTGCAAAGATCAATCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGAATCTT 1467348 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | ||||| | | || ||||| | || | ||||||||||| Sbjct 1467349 GGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACTTCGAGCGTAATTGTCTTGCCGGT 1467408 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || || ||||| Sbjct 1467409 CAGGGTTTTGACAAAGATCTGCAT 1467432 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAGTT 143039 ||| | |||||| || ||||| |||||||| || ||| | || ||| |||||||||| Sbjct 1323609 ATGCAGTGTAGACTCCTTTTGAATGTTGTAGTCAGCTAAA-GTCCTCCCATCTTCGAGTT 1323551 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | || || ||| |||||| | |||||||| ||||| || || || ||||| ||| | Sbjct 1323550 GCTTCCCTGCAAAGATCAATCTCTGCTGATCAGGAGGAATCCCCTCCTTGTCCTGAATCT 1323491 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 | || | | || | ||||| | | || ||||| | || | |||||||||| Sbjct 1323490 TGGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACTTCGAGCGTGATTGTCTTGCCGG 1323431 Query 143160 TCAATGTTTTTACGAATATTTGCAT 143184 ||| ||||| || || || ||||| Sbjct 1323430 TCAGGGTTTTGACAAAGATCTGCAT 1323406 >seq8179 Length=775255 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||| ||| | || ||| ||||| ||||| || ||| Sbjct 378144 GTAGATTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCAAGTTGCTTCCCA 378085 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | |||||||||||||| || || |||||||| || ||| || Sbjct 378084 GCAAAGATCAATCTCTGCTGATCGGGAGGAATCCCCTCTTTGTCCTGGATCTTTGCCTTC 378025 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || ||||||| ||| | ||||| ||||||| ||| Sbjct 378024 ACGTTATCAATAGTGTCTGAGCTCTCAACTTCAAGAGTGATTGTCTTTCCGGTCAGGGTT 377965 Query 143168 TTTACGAATATTTGCAT 143184 || || || |||||||| Sbjct 377964 TTGACAAAGATTTGCAT 377948 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 377946 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCA 377887 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || ||||||||||| ||| | ||||| | ||||| ||||| || Sbjct 377886 AGAGTGCGTCCGTCCTCCAGTTGTTTACCGGCAAATATCAGCCTCTGCTGGTCGGGTGGA 377827 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||||| || | | || | |||||| | | ||| ||| Sbjct 377826 ATCCCTTCCTTGTCCTGGATTTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCGACT 377767 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| ||||| || ||||| Sbjct 377766 TCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 377720 >seq12734 Length=494798 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| || ||| | ||| | ||| | || || || ||||| || ||||| ||| Sbjct 183948 GCCTCCTCTTAGACGGAGAACCAGATGCAGGGTCGACTCCTTTTGAATATTGTAGTCGGC 183889 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || || || ||||||||| || || || ||| |||||||||| ||||| || || || Sbjct 183888 CAAGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCAGGTGG 183829 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||||||||| || || || | | || | ||||||| | || || Sbjct 183828 AATGCCTTCTTTGTCCTGGATCTTGGCCTTAACATTATCAATGGTGTCCGAGCTCTCAAC 183769 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | ||||| || || | ||||| || || |||||||| Sbjct 183768 TTCCAAAGTAATTGTCTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 183721 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||||||| || || | |||||| || ||||| || Sbjct 183233 GTGGATTCCTTCTGGATGTTGTAATCGGCCAGGGTACGGCCGTCTTCCAGCTGTTTTCCG 183174 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| | |||||||| ||||| || || || |||||||| ||||| || || ||| Sbjct 183173 GCAAATATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTT 183114 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || || || | ||| | ||||||||||| | ||| Sbjct 183113 ACATTGTCAATAGTGTCAGAGCTCTCAACCTCGAGAGTGATTGTCTTGCCGGTAAGGGTT 183054 Query 143168 TTTACGAATATTTGCAT 143184 || || || || ||||| Sbjct 183053 TTAACAAAGATCTGCAT 183037 >seq562416 Length=95391 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 18746 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCA 18687 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || || || || |||||| ||||||| | ||||||||||| || Sbjct 18686 AGAGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCGGGCGGA 18627 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| || | | || | ||||| | | ||| ||| Sbjct 18626 ATCCCTTCCTTGTCCTGAATTTTAGCCTTGACATTGTCAATAGTGTCAGAGCTTTCGACT 18567 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 18566 TCCAGAGTGATAGTCTTGCCAGTAAGGGTTTTGACAAAGATCTGCAT 18520 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||||||||| |||||||| ||| || || ||| ||||| ||||| || || Sbjct 53927 GTAGATTCTTTTTGAATGTTGTAGTCGGCCAGAGTCCTCCCATCTTCAAGTTGCTTCCCT 53868 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| || |||||||||||||| || | || || || |||||| || Sbjct 53867 GCAAAGATCAATCGCTGCTGATCGGGAGGAATCCTCTCCTTATCTTGAATTTTGGCCTTG 53808 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || ||||||| || | || || ||||||| ||| Sbjct 53807 ACGTTGTCAATAGTGTCTGAGCTCTCGACTTCAAGCGTGATTGTTTTTCCGGTCAGGGTT 53748 Query 143168 TTTACGAATATTTGCAT 143184 || || || || ||||| Sbjct 53747 TTGACAAAGATCTGCAT 53731 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 53501 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCA 53442 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | || ||||| ||||| |||||| | |||| | ||||||||||| || Sbjct 53441 AGAGTGCGTCCA-TCCTCGAGCTGTTTTCCAGCAAAAATCAACCTCTGCTGATCGGGTGG 53383 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| || | | || | ||||| | | ||| || Sbjct 53382 AATCCCTTCCTTGTCTTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGAGCTTTCGAC 53323 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | |||||||| || | ||||| || || || ||||| Sbjct 53322 TTCTAGTGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 53275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 143046 |||||||| ||||| |||||||| || ||| | || ||| ||||| ||||| ||||| Sbjct 18944 GTAGATTCCTTTTGAATGTTGTAGTCAGCT-AGAGTCCTCCCATCTTCAAGTTGCTTACC 18886 Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106 ||| |||||| | |||||||| ||||| || || || ||||| ||| || || Sbjct 18885 TGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGCCTT 18826 Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | || | ||||| | | || ||||| | || | ||||||||||||| || Sbjct 18825 CACGTTATCAATAGTGTCTGAGCTCTCAACTTCGAGCGTGATTGTCTTGCCGGTCAGGGT 18766 Query 143167 TTTTACGAATATTTGCAT 143184 ||| || || || ||||| Sbjct 18765 TTTGACAAAGATCTGCAT 18748 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| |||||||| || || |||||||||||| Sbjct 53729 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCGGCA 53670 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || || ||||| || ||| | ||||| | ||||| ||||| || Sbjct 53669 AGAGTGCGTCCGTCCTCAAGCTGTTTTCCTGCAAAAATCAGCCTCTGCTGGTCGGGTGGA 53610 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| || | | || | || || | ||| ||| Sbjct 53609 ATACCTTCCTTGTCTTGAATTTTGGCCTTGACATTGTCAATTGTATCAGAACTTTCGACT 53550 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 53549 TCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 53503 >seq23608 Length=1529151 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 16699 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCA 16640 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | || ||||| ||||| |||||| |||||| | ||||| ||||| || Sbjct 16639 AGAGTGCGTCCA-TCCTCGAGCTGTTTTCCAGCAAAGATCAACCTCTGCTGGTCGGGTGG 16581 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| || | | || | ||||| | | ||| || Sbjct 16580 AATCCCTTCCTTGTCTTGAATTTTAGCCTTCACATTGTCAATTGTGTCAGAGCTTTCGAC 16521 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | |||||||| || | ||||| || || || ||||| Sbjct 16520 TTCTAGAGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 16473 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||||||||| |||||||| ||| || || ||| ||||| ||||| || || Sbjct 17353 GTAGATTCTTTTTGAATGTTGTAGTCGGCCAGAGTCCTCCCATCTTCAAGTTGCTTCCCT 17294 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | |||||||| ||||| || || || ||||| ||| || || Sbjct 17293 GCAAAGATCAATCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGAATCTTGGCCTTC 17234 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || ||||| | || | ||||||||||||| ||| Sbjct 17233 ACATTATCAATGGTGTCTGAGCTCTCAACTTCGAGCGTAATTGTCTTGCCGGTCAGGGTT 17174 Query 143168 TTTACGAATATTTGCAT 143184 || || || || ||||| Sbjct 17173 TTGACAAAGATCTGCAT 17157 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || ||| | ||| | |||| || ||||| || || ||||||||||| Sbjct 16927 CCCCCTCTTAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCTGCG 16868 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| |||||| ||||||| | ||||| ||||| || Sbjct 16867 AGAGTGCGTCCGTCCTCGAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCGGGTGGA 16808 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| || | | || | || || | | || ||| Sbjct 16807 ATCCCTTCCTTGTCTTGAATTTTAGCCTTAACGTTATCAATAGTATCTGAGCTCTCAACT 16748 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | || || ||||||| ||||| || || || ||||| Sbjct 16747 TCAAGCGTGATTGTTTTTCCGGTCAGAGTTTTGACAAAGATCTGCAT 16701 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| || ||||| || || |||||||||||| Sbjct 17155 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCA 17096 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| || ||| | ||||| | || || ||||| || Sbjct 17095 AGAGTGCGTCCGTCCTCGAGCTGTTTTCCGGCAAAAATCAGCCTCTGTTGGTCGGGTGGA 17036 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| |||||| || | | || | || || | ||| ||| Sbjct 17035 ATGCCTTCCTTGTCTTGAATTTTGGCCTTGACATTGTCAATTGTATCAGAACTTTCGACT 16976 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 16975 TCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 16929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 142989 TAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAG 143048 ||||||| ||||| |||||||| ||| | || ||| ||||| ||||| || | | Sbjct 311105 TAGATTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCTCATCTTCAAGTTGCTTTCTGG 311046 Query 143049 CATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTA 143108 | |||||| | |||||||||| ||||||| || || || || ||| || || | Sbjct 311045 AAAAGATCAATCTTTGCTGATCGAGAGGTATCCCCTCCTTATCCTGAATCTTGGCCTTCA 310986 Query 143109 GCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTT 143168 | || | ||||| | | || ||||||| || | |||||||| |||| |||| Sbjct 310985 CGTTATCAATAGTGTCTGAGCTCTCAACTTCAAGCGTGATTGTCTTGCCAGTCAGGGTTT 310926 Query 143169 TTACGAATATTTGCAT 143184 || ||||||||||| Sbjct 310925 CGACAAATATTTGCAT 310910 >seq208113 Length=327308 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 143027 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 143086 ||| ||||||| ||||| |||||| ||||||| | ||||||||||| || || ||||| Sbjct 325150 GAGGCTTCGAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCGGGTGGAATCCCTTCC 325209 Query 143087 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTC 143146 ||||| |||||| || | | || | ||||| | | ||| ||||| | ||| Sbjct 325210 TTGTCTTGAATTTTAGCCTTGACGTTGTCAATTGTGTCAGAGCTTTCGACTTCCAGAGTG 325269 Query 143147 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | ||||||||||||| ||||| || || || ||||| Sbjct 325270 ATTGTCTTGCCGGTCAGGGTTTTGACAAAGATCTGCAT 325307 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||| | |||||| || ||||| |||||||| ||| | || ||| ||||||||||| Sbjct 324580 ATGCAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCGAGTTG 324639 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 || || ||| |||||| | |||||||| ||||| || || || ||||| ||| || Sbjct 324640 CTTCCCTGCAAAGATCAATCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGAATCTT 324699 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | ||||| | | || ||||| | || | ||||||||||| Sbjct 324700 GGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACTTCGAGCGTAATTGTCTTGCCGGT 324759 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 || ||||| || || || ||||| Sbjct 324760 CAGGGTTTTGACAAAGATCTGCAT 324783 >seq5369 Length=633823 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG--TCTTCGAGTT 143039 |||| || ||||| || || || ||||| ||| || ||| |||| ||||| |||| Sbjct 631426 TGAAGGGTGGATTCCTTCTGGATATTGTAGTCGGCCAATGT--TCGACCATCTTCCAGTT 631483 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | || |||||| |||| ||||| |||||||| || || || || || ||||| || | Sbjct 631484 GCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGGATCT 631543 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 | || | | || | ||||||| | ||| ||||| | ||| | |||||||| | Sbjct 631544 TGGCCTTCACATTGTCAATGGTGTCCGAGCTTTCAACTTCCAAAGTAATAGTCTTGCCAG 631603 Query 143160 TCAATGTTTTTACGAATATTTGCAT 143184 | | ||||| || ||||||||||| Sbjct 631604 TGAGAGTTTTGACAAATATTTGCAT 631628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTTGTTTAC 143045 |||||||| || || || ||||| ||| || || |||| |||||| || || || | Sbjct 289165 GTAGATTCCTTCTGAATATTGTAGTCGGCCAGGGT--TCGACCGTCTTCTAGCTGCTTTC 289222 Query 143046 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 143105 | ||| |||||||||| ||||||||||| || |||||||| ||||| || || | Sbjct 289223 CCGCAAAGATCAGACGCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 289282 Query 143106 TTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 143165 ||| | || | ||||| | | ||| || || | || | |||||| || || | | Sbjct 289283 TTACATTGTCAATAGTGTCGGAGCTTTCAACCTCGAGGGTAATCGTCTTACCAGTGAGAG 289342 Query 143166 TTTTTACGAATATTTGCAT 143184 |||| || || || ||||| Sbjct 289343 TTTTAACAAAGATCTGCAT 289361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG--TCTTCGAGTTGTTTAC 143045 || ||||| || || | ||||| ||| | ||| |||| |||||||| || || | Sbjct 370721 GTGGATTCCTTCTGAACATTGTAGTCGGCAAGTGT--TCGACCATCTTCGAGCTGCTTTC 370778 Query 143046 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 143105 ||||| |||||||||| ||||| || || || || ||||| ||||| ||||| | Sbjct 370779 CAGCAAAGATCAGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGGATTTTGGCCT 370838 Query 143106 TTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 143165 | | | || | ||||| | | || ||||| | ||| | |||||||||||| | | Sbjct 370839 TAACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCGGTGAGGG 370898 Query 143166 TTTTTACGAATATTTGCAT 143184 |||| || || || ||||| Sbjct 370899 TTTTGACAAAGATCTGCAT 370917 >seq74129 Length=283392 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || || ||||||||| | || | ||||||||| ||||| ||| Sbjct 222952 GTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCGTCTTCGAGCTGTTTTCCA 222893 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||| |||||||||||||||| || ||||| |||||||| ||||| Sbjct 222892 GCAAAGATCAGACGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 222849 >seq99438 Length=371102 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTG 143040 |||| ||||||||||||| || |||||||| | || | || | || || | || Sbjct 358158 TGAAGAGTAGATTCTTTTTTAATATTGTAATCAGCAAGGGTCCGTCCA-TCCTCCAACTG 358100 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 || |||||| | || || | ||||||| | || || |||||||| ||||| || || Sbjct 358099 CTTTCCAGCAAATATGAGTCTTTGCTGAACAGGGGGAATGCCTTCCTTGTCTTGGATCTT 358040 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 ||| | | || | |||||| | | ||||| || | ||| | ||||| ||||| Sbjct 358039 GGCTTTCACATTATCAATCGTGTCAGAGCTCTCTACCTCCAGAGTTATAGTCTTTCCGGT 357980 Query 143161 CAATGTTTTTACGAATATTTGCATAGC 143187 |||||| || || ||||| |||||||| Sbjct 357979 CAATGTCTTCACAAATATATGCATAGC 357953 >seq47591 Length=204778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| | ||| | |||| ||| | || ||||| || || |||||||| ||| Sbjct 42617 CCACCTCTCAGACGGAGGACTAGATGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCA 42558 Query 143018 ATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || |||| ||| ||||| || || |||||| ||||||||||||||||||| || | Sbjct 42557 AGGGT--TCGACCGTCCTCGAGCTGCTTCCCAGCAAAGATCAGACGTTGCTGATCAGGGG 42500 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | |||||||| || || || || |||| | || | || || | | || | Sbjct 42499 GGATGCCTTCCTTATCCTGGATCTTGGTCTTTACATTGTCAATTGTATCAGAGCTCTCGA 42440 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | || | ||| | ||||||||||| | || || || || |||||||| Sbjct 42439 CCTCGAGAGTGATAGTCTTGCCGGTTAGCGTCTTAACAAAGATTTGCAT 42391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 |||||||| || || |||||| |||||||||| ||||| ||||| || ||||||||||| Sbjct 42773 TCTTCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGAATGCCTTCTTTA 42714 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || || | | || | ||||| | | || || || | ||| | Sbjct 42713 TCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATT 42654 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||||| | ||||| ||||| |||||||| Sbjct 42653 GTCTTACCGGTGAGGGTTTTGACGAAGATTTGCAT 42619 >seq6925 Length=347220 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTTGTTTAC 143045 || ||||| || || |||||||| ||| | || |||| ||||||||| || || | Sbjct 135340 GTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGT--TCGACCGTCTTCGAGCTGCTTCC 135397 Query 143046 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 143105 ||||| | ||||||||||||||||| || || |||||||| || || || || | Sbjct 135398 CAGCAAAAATCAGACGTTGCTGATCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCT 135457 Query 143106 TTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 143165 ||| | || | || || | | || || || | ||| | ||||||||||| | | Sbjct 135458 TTACATTATCGATGGTATCGGAGCTCTCGACCTCGAGAGTGATAGTCTTGCCGGTTAGGG 135517 Query 143166 TTTTTACGAATATTTGCAT 143184 |||| || || |||||||| Sbjct 135518 TTTTAACAAAGATTTGCAT 135536 >seq1025 Length=463399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026 ||||| | || | ||| | |||||||| ||||| || || || || || || | Sbjct 45955 AAACGGAGGACAAGATGCAGGGTAGATTCCTTTTGAATATTATAGTCTGCCAGGGTCCGG 45896 Query 143027 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 143086 ||||||||| || || || ||| | |||||||| ||||| || || || || ||||| Sbjct 45895 CCGTCTTCGAGCTGCTTTCCGGCAAATATCAGACGCTGCTGGTCAGGCGGAATTCCTTCC 45836 Query 143087 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTC 143146 ||||| || || ||||| | || | || |||| | || ||||| | || Sbjct 45835 TTGTCCTGTATCTTGGCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAATGTT 45776 Query 143147 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | |||||||||||| | ||||| ||||| || ||||| Sbjct 45775 ATCGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 45738 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||||||| | || || ||| ||||| || || ||| Sbjct 46162 GTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTGCTTTCCA 46103 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||| ||||| ||||| || || || ||||| ||||| || || || ||| Sbjct 46102 GCAAAGATTAGACGCTGCTGGTCAGGGGGAATGCCCTCTTTATCCTGGATCTTGGCTTTG 46043 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || ||||| | ||| | |||||| || || | ||| Sbjct 46042 ACATTATCAATGGTGTCGGAGCTCTCAACTTCCAAAGTGATCGTCTTTCCAGTGAGGGTT 45983 Query 143168 TTTACGAATATTTGCATA 143185 || || || || |||||| Sbjct 45982 TTAACAAAAATCTGCATA 45965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480059632205040