Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq96291 102 2e-16 >seq96291 Length=363031 Score = 102 bits (112), Expect = 2e-16 Identities = 230/346 (66%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 149151 TCATTTGGACCGCTGAGATTCGTCGGCATGACTGAGACGAAATTACATCCATATTGTTTT 149210 ||||||||||| ||||| || |||||| | || |||| ||||| ||||| | Sbjct 205982 TCATTTGGACCATACAGATTAGTGGGCATGCCAGA-----AATTGCATCCCAATTGTACT 205928 Query 149211 -----CTGTAAGCATCACACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGT 149265 | ||||| | ||||| | || || || || || || || ||||| | || Sbjct 205927 GAAGACGATAAGCTTGGCACATTTTTATCCCAGCAATCTTAGCAATAGCGTACCACTCGT 205868 Query 149266 TAGTGGGTTCGAGAAATCCTGTCATCAGATATTCTTCCTTGATAGGATTTTGAGCTTCTT 149325 ||||||| || ||| || |||| || |||||| ||||||| | | || | Sbjct 205867 TAGTGGGCTCCAGAGGACCAGTCAAAAGTGCTTCTTCTGTGATAGGTTGCGGGGCAAACT 205808 Query 149326 TTGGGTAAATGCAACTGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACG 149385 |||| ||||||||| ||| ||||||| || || |||||||| | | | | | Sbjct 205807 TTGGATAAATGCAAGAAGAACCCAGAAACAGTAGCTTCTTCACTCCATTCTTATAGCTTG 205748 Query 149386 CATGAATGACATTCGTCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGT 149445 ||| || ||||| || |||||| ||||||| | || ||||| | | | | | Sbjct 205747 CATCGATCACATTTGTTTGAATCTGCAGATTAATGGCTATGAAATCAGCAGGGTAAGTAT 205688 Query 149446 TGTTCGCGTGAATACCTCCTACTTTTGCAGCCGCGAGAAATACGTA 149491 |||| || ||||||||||| ||||| || || |||| || ||| || Sbjct 205687 TGTTGGCATGAATACCTCCAACTTTCGCTGCTGCGACAATTACATA 205642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1042780974876950