Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17] 4,253,097 sequences; 27,602,653,187 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq56275 113 5e-20 seq852351 102 9e-17 seq86877 102 9e-17 seq570714 100 3e-16 seq111246 98.7 1e-15 seq209355 96.9 4e-15 seq73847 95.1 1e-14 seq63249 95.1 1e-14 seq369028 93.3 4e-14 seq118541 93.3 4e-14 seq19246 93.3 4e-14 seq16500 93.3 4e-14 seq74796 91.5 2e-13 seq398011 86.0 7e-12 seq38403 86.0 7e-12 seq151784 84.2 2e-11 seq78198 82.4 8e-11 >seq56275 Length=114807 Score = 113 bits (124), Expect = 5e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| | ||||||| ||| | || | |||||||| ||||||||| Sbjct 26228 CCTCCTTGATCTACATAGCGAGCAGTATCATTAAACACACGCAACATTGGCACAATACCA 26169 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| || ||| Sbjct 26168 TTTGATGTGCCATTTGTTCCACGTATGTAACTATTTGTTGAACGAATATTATGGATCGAA 26109 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || || ||||| ||| || | |||||| ||| |||||||||||||| Sbjct 26108 ACTCCAATGCCTCCTGCTGATTTGCTAATCACAGCACATTCTTTGAGGGTATCATAAATA 26049 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || |||||||| ||||| | ||||| || ||| Sbjct 26048 CCTTCAATGCTATCATCCTTCATACAGATAAGAAAGCAGCTA 26007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| || |||||||||||||| ||||||| || ||| | ||| | Sbjct 25676 AGTTCCACCATTAAACAAAGTTGGAGATGCATGCGTAAACCAACGCTGTGACATCAAATG 25617 Query 48659 ATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTA 48717 ||| || | ||| |||| || || || | ||| || || || | ||| || | ||| | Sbjct 25616 ATAAGTCTTGATAGCAGATTCGATGTCATCCTTG-TGAATTCCCACAGAAACCCTCATCA 25558 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||||| |||||| || || |||| ||| | ||| || | || || | |||| Sbjct 25557 ACATATGTTGAGGCCTCTCCACAACAACCCCATTCAATTTTAACAAGTAGGACCTCTCCA 25498 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 |||| || || ||||| |||| ||| ||| || |||||| || ||| Sbjct 25497 ATGTCTTGAAGCCAAAGTAGTCATATTCAAAATCCCTATCATAGATTATT 25448 >seq852351 Length=70276 Score = 102 bits (112), Expect = 9e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||| ||||| ||| ||| ||| ||| | || |||||||| ||||||||| Sbjct 34843 CCTCCTTAATCTACATAGTGAGCAATATGATTAAACACATGCAACATTGGCACAATACCA 34902 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| |||||| Sbjct 34903 TTTGATGTGCCATTTGTTCCATGTATGTAACTATTTGTTGAACGAATATTATGGATTGAA 34962 Query 48480 ATACCTATACCACCTGCC-ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || ||||| ||||| | || | | |||| ||| |||||||||||||| Sbjct 34963 ACTCCAATTCCTCCTGCTGATTTTCTA-ATCACAACACATTTTTTGAGGGTATCATAAAT 35021 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || |||||||| ||||| | ||||| |||||| Sbjct 35022 ACCTTCAATGCTATCATCCTTCATACAAATAAGAAAGCAACTA 35064 >seq86877 Length=569069 Score = 102 bits (112), Expect = 9e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| ||||||| ||| | || | ||||||| ||||| ||| Sbjct 51818 CCTCCTTGATCTACATAGTGAGCAGTATCATTAAACACACACAACATTGCCACAATGCCA 51877 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| |||||| Sbjct 51878 TTTGATGTGCCATTTGTTCCACGTATGTAACTCTTTGTTGAACGAATATTATGGATTGAA 51937 Query 48480 ATACCTATACCACCTGC-CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || | ||| |||||| | || | | |||| ||| |||||||||||||| Sbjct 51938 AATCCAATGCCTCTTGCTGATTTTATA-ATCACAACACATTATTTTAGGGTATCATAAAT 51996 Query 48539 TCCTTCTATACTATCATCTATCATA 48563 ||||| || |||||||| ||||| Sbjct 51997 ACCTTCAATGCTATCATCCTTCATA 52021 >seq570714 Length=178535 Score = 100 bits (110), Expect = 3e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 |||||||||| || ||| | || |||| ||| | || | |||||||| ||||| ||| Sbjct 58074 CCTCCTTGATATACATAGCGAGCGGTATCATTAAACACAC--AACATTGGCACAATGCCA 58131 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| || ||| Sbjct 58132 TTTGATGTGCCATTTGTTCCACGTATGTAACTATTTTTTGAACGAATATTATGGATCGAA 58191 Query 48480 ATACCTATACCACCTGCC-ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || ||||| ||||| | || | | |||| |||||||||||||||||| Sbjct 58192 ACTCCAATGCCTCCTGCTGATTTTCTA-ATCACATCACATTCTTTAAGGGTATCATAAAT 58250 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || |||||||| ||||| | ||||| || ||| Sbjct 58251 ACCTTCAATGCTATCATCCTTCATACAGATAAGAAAGCAGCTA 58293 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| || |||||||||||||| |||||| | || ||| | ||| | Sbjct 58625 AGTTCCACCATTAAACAAAGTTGGAGATGCATGCATAAACGAACACTGTGACATCAAATG 58684 Query 48659 ATATGTTTCAATAACAGAATCTAT---ATCCCATTGATGTATACCTATAGATACACGCAT 48715 ||| || | ||| || | || || |||| ||| || || || | ||| || | ||| Sbjct 58685 ATAAGTCTTGATAGCATATTCAATGCCATCC--TTG-TGGATTCCCACAGAAACCCTCAT 58741 Query 48716 TAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTC 48775 ||||||| |||||| || || |||| ||| | ||| || | | || | || Sbjct 58742 CAACATATGTTGAGGACTCTCCACAACAACCCCATTCAATTTTAACAAGCAGGACCTCTC 58801 Query 48776 CAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 |||||| || || ||||| |||| ||| ||| || |||||| || ||| Sbjct 58802 CAATGTCTTGAAGCCAAAGTAGTCATATTCAAAATCTCTATCATAGATTATT 58853 >seq111246 Length=218547 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||| ||| ||| | | ||||| ||| | || | |||||||| ||||| ||| Sbjct 12397 CCTCCTTGACCTACATAGCGAGAAGTATCATTAAACACACATAACATTGTCACAATTCCA 12338 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| |||| || ||||| | | | |||||| |||||| Sbjct 12337 TTTGATGTGCCATTCATTCCACGTATGTAACTATTTATTGAACGAATATTATGGATTGAA 12278 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || || ||| | ||| || | | |||| ||| |||||||||||||| Sbjct 12277 ACTCCAATGCCTCCTACTGATTTGCTAATCACAACACATTCTTTGAGGGTATCATAAATA 12218 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || |||||||| |||||| || ||||| || ||| Sbjct 12217 CCTTCAATGCTATCATCCTTCATATATATAAGAAATCAGCTA 12176 >seq209355 Length=419006 Score = 96.9 bits (106), Expect = 4e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 48361 CTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCAT 48420 |||||||||||| ||| | ||||| ||| | || | ||||||||| ||||| |||| Sbjct 263083 CTCCTTGATCTACATAGTGAGTAGTATCATTAAATACACATAACATTGGCACAATTCCAT 263142 Query 48421 TTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAA 48480 ||||| | ||||| |||| || ||||| | | | |||||| || |||| Sbjct 263143 TTGATGTGCCATTCATTCCACGTATGTAACTATTTATTGAACCAATATTATGGATCGAAA 263202 Query 48481 TACCTATACCACCT-GCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 || || || || | ||||| | || | | |||| ||| |||||||||||||| Sbjct 263203 CTCCAATGCCTGCTGGTGATTTTCTA-ATCACAACACATTCTTTGAGGGTATCATAAATA 263261 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 | ||| || ||||||||| |||||| | ||||| |||||| Sbjct 263262 CGTTCAATGCTATCATCTTTCATATAGATAAGAAAGCAACTA 263303 >seq73847 Length=1089629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| ||||||||||||||| | ||||||| | || ||| | ||| | Sbjct 999247 AGTTCCACCATTAAACAATGTTGGAGATGCACGCGTAAACCAATGCTGTGACATCAAATG 999188 Query 48659 ATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTA 48717 ||| || | |||||||| || || || | ||| || || || ||||| || | ||| | Sbjct 999187 ATAAGTCTTGATAACAGATTCAATGTCATCCTTG-TGGATTCCCATAGAAACCCTCATCA 999129 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||||| |||||| || || |||| ||| | ||| || | || || | |||| Sbjct 999128 ACATATGTTGAGGCCTCTCCACAACAACCCCATTCAATTTTAACAAGTAGGACCTCTCCA 999069 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 48811 ||| || || ||||| |||| ||| ||| || Sbjct 999068 ATGCCTTGAAGCCAAAGTAGTCATATTCAAAATC 999035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| | ||||||| ||| | || | |||||||| ||||| ||| Sbjct 999800 CCTCCTTGATCTACATAGCAAGCAGTATCATTAAACACACACAACATTGGCACAATGCCA 999741 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | |||| ||||| || ||||| | | | |||||| || ||| Sbjct 999740 TTTGATGTGTCATTTGTTCCACGTATGTAACTATTTTTTGAACGAATATTATGGATCGAA 999681 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || ||||| ||||| ||| || | | |||| ||| |||||||||||||| Sbjct 999680 ACTCCAATACCTCCTGCTGGTTTTCTAATCACAACACATTCTTTGAGGGTATCATAAATA 999621 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 || || || |||| || |||||| | ||||| || ||| Sbjct 999620 CCATCAATGTTATCGTCCTTCATATAGATAAGAAAGCAGCTA 999579 >seq63249 Length=59642 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| ||||||| ||| | || | |||||||| ||||| ||| Sbjct 26019 CCTCCTTGATCTACATAGTGAGCAGTATCATTAAACACACATAACATTGACACAATTCCA 26078 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| |||| | || ||||| | | | |||||| || ||| Sbjct 26079 TTTGATGTGCCATTCATTCCACATATGTAACTATTTATTGAACCAATATTAAGGATCGAA 26138 Query 48480 ATACCTATACCACCT-GCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || ||| | ||||| | || | | |||| | | |||||||||||||| Sbjct 26139 ACTCCAATGCCTCCTGGTGATTTTTTA-ATCACAACACATTCTATGAGGGTATCATAAAT 26197 Query 48539 TCCTTCTATACTATCATCTATCATAT 48564 ||||| || |||||||| |||||| Sbjct 26198 ACCTTCAATGCTATCATCCTTCATAT 26223 >seq369028 Length=352451 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 || |||||||| | ||| | ||||||| || | || || |||||||| ||||||||| Sbjct 63458 CCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGGCACAATACCA 63517 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| ||||| |||||||| | | || | || ||| | |||| Sbjct 63518 TTCGATGTGCCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTTATGTACTGAA 63577 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| | || || || ||| ||||| ||||| || || |||||||| || Sbjct 63578 ACACCAAGTCCTCCAGCTGATTTGCTTATTACGGCACATTCCTTTAGAGTATCATATATC 63637 Query 48540 CCTTCTATACTATCATCTATCATA 48563 || || || ||||||||| ||||| Sbjct 63638 CCCTCAATGCTATCATCTTTCATA 63661 >seq118541 Length=626481 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 |||||||||| || ||| | ||||||| ||| | || |||||||| ||| | ||| Sbjct 163170 CCTCCTTGATATACATAGCGAGCAGTATCATTAAACACATGCAACATTGGCACATTTCCA 163111 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| || ||| Sbjct 163110 TTTGATGTGCCATTTGTTCCACGTATGTAACTATTTGTTGAACAAATATTATGGATCGAA 163051 Query 48480 ATACCTATACCACCTGCC-ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || | || ||||| | || | | |||| |||||||||||||||||| Sbjct 163050 ACTCCAATGCCTCTTGTTGATTTTCTA-ATCACATCACATTCTTTAAGGGTATCATAAAT 162992 Query 48539 TCCTTCTATACTATCATCTATCATA 48563 ||||| ||||||||||| ||||| Sbjct 162991 ACCTTCAATACTATCATCCTTCATA 162967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| || ||||||||||||| |||||||| || ||| | ||| | Sbjct 162617 AGTTCCACCATTAAACAAATTTGGAGATGCATGCATAAACCAACACTGTGACATCAAATG 162558 Query 48659 ATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTA 48717 ||| || | ||| || | || || || | ||| || || || | ||| |||| ||| | Sbjct 162557 ATAAGTCTTGATAGCATATTCAATGTCATCCTTG-TGGATTCCCACAGAAACACTCATCA 162499 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||||| |||||| || | |||| || | ||| || | || || | |||| Sbjct 162498 ACATATGTTGAGGCCTCCCCACAAAAACCCCGTTCAATTTTAACAAGTAGGACCTCTCCA 162439 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 |||| || || ||||| |||| ||| ||| || |||||| || ||| Sbjct 162438 ATGTCTTGAAGCCAAAGTAGTCATATTCAAAATCCCTATCATAGATTATT 162389 >seq19246 Length=439232 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 |||||||||| || ||| | ||| ||| ||| | || | |||||||| ||||| ||| Sbjct 410787 CCTCCTTGATATACATAGCGAGCAATATCATTAAACACACACAACATTGGCACAATGCCA 410846 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || || || | | | |||||| || ||| Sbjct 410847 TTTGATGTTCCATTTGTTCCACGTATGTATCTATTTGTTGAACGAATATTATGGATCGAA 410906 Query 48480 ATACCTATACCACCTGCC-ATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || ||||| ||||| | || | | |||| |||||| ||||||||||| Sbjct 410907 ACTCCAATGCCTCCTGCTGATTTTCTA-ATCACATCACATTCTTTAAGAGTATCATAAAT 410965 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || |||||||| ||||| | ||||| || ||| Sbjct 410966 ACCTTCAATGCTATCATCCTTCATACAGATAAGAAAGCAGCTA 411008 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| || |||||||||||||| |||||||| || ||| | ||| | Sbjct 411337 AGTTCCACCATTAAACAAAGTTGGAGATGCATGCATAAACCAACACTGTGACATCAAATG 411396 Query 48659 ATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTA 48717 ||| || | ||| || | || || || | ||| || || || | ||| || | ||| | Sbjct 411397 ATAAGTCTTGATAGCATATTCAATGTCATCCTTG-TGGATTCCCACAGAAACCCTCATCA 411455 Query 48718 ACATATATTGAGGTCTTT---CAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTT 48774 |||||| |||||| || | |||||| || | ||||| | ||| || || | | Sbjct 411456 ACATATGTTGAGGACTCTCCACAACAACCCCGT--TCAATTTTAACAAG-TAGGACCTCT 411512 Query 48775 CCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 ||||||| || || ||||| |||| ||| ||| || |||||| || ||| Sbjct 411513 CCAATGTCTTGAAGCCAAAGTAGTCATATTCAAAATCCGTATCATAGATTATT 411565 >seq16500 Length=780930 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| | |||||| || |||||||||||||| ||||||| || ||| | ||| | Sbjct 148924 AGTTCCAGCATTAAACAAAGTTGGAGATGCATGCGTAAACCAACACTATGAAATCAAATG 148983 Query 48659 ATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTA 48717 ||| || | ||| |||| || || || | ||| || || | | ||| || | ||| | Sbjct 148984 ATAAGTCTTGATAGCAGATTCAATGTCATCCTTG-TGGATTCTCACAGAAACCCTCATCA 149042 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||||| |||||| || || ||||| ||| | ||| || | || | | |||| Sbjct 149043 ACATATGTTGAGGCCTCTCCACAATAACCCCATTCAATTTTAACAAGTAGTACCTCTCCA 149102 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 |||| || || ||||| |||| ||| ||| || |||||| || ||| Sbjct 149103 ATGTCTTGAAGCCAAATTAGTCATATTCAAAATCCCTATCATAGATTATT 149152 >seq74796 Length=712879 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| |||||| || |||||||||||||| ||||||| | | ||| | ||| | Sbjct 642922 AGTTCCACCATTAAACAAAGTTGGAGATGCATGGGTAAACCAACTTTGTGACATCAAATG 642981 Query 48659 ATATGTTTCAATAACAGAATCTAT---ATCCCATTGATGTATACCTATAGATACACGCAT 48715 ||| || | ||| |||| || || |||| ||| || || || ||||| || | || Sbjct 642982 ATAAGTCTTGATAGCAGATTCAATGAAATCC--TTG-TGGATTCCCATAGAAACCCTAAT 643038 Query 48716 TAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTC 48775 ||||||| |||||| || || |||| ||| | ||| || | || || | || Sbjct 643039 CAACATATGTTGAGGCCTCTCCACAACAACCCCATTCAATTTTAACAATTAGGACCTCTC 643098 Query 48776 CAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 |||||| || || ||||| || | ||| |||| || |||||| || ||| Sbjct 643099 CAATGTCTTGAAGCCAAAGTATTCATATTAAAAATCCCTATCATAGATTATT 643150 >seq398011 Length=89584 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| | | | ||| ||| | || | |||||||| ||||| ||| Sbjct 72801 CCTCCTTGATCTACATAGCGAGAAATATCTTTAAACACACACAACATTGGCACAATGCCA 72742 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| | || || ||||| | | |||||| || ||| Sbjct 72741 TTTGATGTGCCATTTTTCCCACGTATGTAACTATTTGTTGAAAGAATATTATGGATCGAA 72682 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || || ||||| ||| || | |||||| ||| |||||||||||||| Sbjct 72681 ACTCCAATGCCTCCTGCTGATTTGCTAATCATAGCACATTCTTTGAGGGTATCATAAATA 72622 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAA 48574 ||||| || |||||||| ||||| || ||||| Sbjct 72621 CCTTCAATGCTATCATCCTTCATACATATAAGAAA 72587 >seq38403 Length=1032131 Score = 86.0 bits (94), Expect = 7e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| ||||||| ||| | || |||||| | ||||| ||| Sbjct 534384 CCTCCTTGATCTACATAGTGAGCAGTATCATTAAACACAGGGAACATTAGCACAATGCCA 534325 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| || ||| Sbjct 534324 TTTGATGTGCCATTTGTTCCACGTATGTAACTAATTGTTGAACGAATATTATGGATCGAA 534265 Query 48480 ATACCTATACCACCTGC-CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || ||||| ||||| | || | | |||| ||| |||||||||||||| Sbjct 534264 ACTCCAATGCCTCCTGCTGATTTTCTA-ATGAAAACACATTCTTTGAGGGTATCATAAAT 534206 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574 ||||| | | ||||||| | ||| || ||||| Sbjct 534205 ACCTTCAACAATATCATCCTTAATACATATAAGAAA 534170 >seq151784 Length=210550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| | ||||||| ||| |||| |||||||| ||||| ||| Sbjct 82470 CCTCCTTGATCTACATAGCGAGCAGTATCATTAAAAACATGCAACATTGGCACAATGCCA 82411 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 ||| || | ||||| ||||| || ||||| | | | |||||| | ||| Sbjct 82410 TTTTATGTGCCATTTGTTCCACGTATGTAACTATTTGTTGAACGAATATTATGGTTCGAA 82351 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || || |||| | ||| || | | |||| || |||||||||||||| Sbjct 82350 AATCCAATGCCTCCTGTCGATTTGCTAATCACAACACATTCTTCGAGGGTATCATAAATA 82291 Query 48540 CCTTCTATACTATCATCTATCATA 48563 ||||| || ||||| || ||||| Sbjct 82290 CCTTCAATGCTATCGTCCTTCATA 82267 >seq78198 Length=574559 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 ||||||||||||| ||| | ||| ||| ||| | || | ||||| | ||||| || Sbjct 566538 CCTCCTTGATCTACATAGCGAGCAATATCATTAAACACACGACACATTAGCACAATGCCT 566597 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 |||||| | ||||| ||||| || ||||| | | | |||||| |||||| Sbjct 566598 TTTGATCTGCCATTTGTTCCACGTATGTAACTATTTGTTGAACGAATATTATGGATTGAA 566657 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | || || | ||||| | ||| || | || | ||| |||||||||||||| Sbjct 566658 ACTCCAATGGCTCCTGCTAATTTTCTAATCACGACAAATTATTTGAGGGTATCATAAATA 566717 Query 48540 CCTTCTATACTATCATCTATCATAT 48564 ||||| || |||||||| |||||| Sbjct 566718 CCTTCAATGCTATCATCCTTCATAT 566742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532225009363080